Sequence 1: | XP_006500638.1 | Gene: | Lama5 / 16776 | MGIID: | 105382 | Length: | 3745 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_723870.1 | Gene: | wb / 43946 | FlyBaseID: | FBgn0261563 | Length: | 3375 | Species: | Drosophila melanogaster |
Alignment Length: | 4216 | Identity: | 925/4216 - (21%) |
---|---|---|---|
Similarity: | 1434/4216 - (34%) | Gaps: | 1584/4216 - (37%) |
- Green bases have known domain annotations that are detailed below.
Mouse 44 GGDGFSLHPPYFNLAEGARITASATCGEEAPTRSVSRPTEDLYCKLVGGPVAGGDPNQTIQGQYC 108
Mouse 109 DICTAANSNKA--HPVSNAIDG----------TERWWQSPPLSRGLEYNEVNVTLDLGQVFHVAY 161
Mouse 162 VLIKFANSPRPDLWVLERSTDFGHTYQPWQFFASSKRDCLERF---GPRTLERITQDDDVICTTE 223
Mouse 224 YSRIVPLENGEIVVSLVNGRPGALNFSYSPLLRDF--TKATNIRLRFLRTNTLLGHLMGKALRDP 286
Mouse 287 TVTRRYYYSIKDISIGGRCVCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCDRCCPGFNQQPWK 351
Mouse 352 PATTDSANECQSCNCHGHAYDCYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPG 416
Mouse 417 FFRAPDQPLDSPHVCRPCDCESDFTDGTCEDLTGRCYCRPNFTGELCAACAEGYTDFPHCYPLPS 481
Mouse 482 FPHNDTREQVLPAGQIVNCDCNAAGTQGN--ACRKDPRLGRCVCKPNFRGAHCELCAPGF----- 539
Mouse 540 -HGPSCHPCQCSSPGV--------------------------------------------ANSLC 559
Mouse 560 DPE-------------------------------------------------------------- 562
Mouse 563 ----------------------------------------------------------------- 562
Mouse 563 --------------SG-------------QCMCRTGFEGDRCDHCALGY--------FHFPLCQL 592
Mouse 593 CGCSPAGTLPEGCD-EAGRC-QCRPGFDGPHCDRCLPGYHGYP------DCHACAC---DPRGAL 646
Mouse 647 DQQCGVGG------------------LC-HCRPGYTGATCQECSPGFYGFP-----SCIPCHCSA 687
Mouse 688 DGSLHTTCDPTTGQCRCRPRVTGLHCDMCVPGAYNFPYCEAGSCHPAGLAPANPALPETQAPCMC 752
Mouse 753 RAHVEGPSCDRCKPGYWGLSASNPEGCTRCSCDPRGTLGGVTECQGNGQCFCKAHVCGKTCAACK 817
Mouse 818 DGFFGLDYADYFGCRSCRCDVGGALGQG-CEPKTGACRCRPNTQGPTCSEPAKDHYLPDLHHMRL 881
Mouse 882 ELEEAATPEGHAVRFGFNPLEFENFSWRGYAHMMAIQPRIVARLNVTSPDLFRLVFRYVNRGSTS 946
Mouse 947 VNGQISVREEGKLSSCTNCTEQSQPVAFPPSTEPAFVTVPQRGFGEPFVLNPGIWALLVEAEGVL 1011
Mouse 1012 LDYVVLLPSTYYEAALLQHRVTEACTYRPSALHSTENCLVYAHLPLDGFPSAAGTEALCRHDNSL 1076
Mouse 1077 PRPCPTEQLSPSHPPLATCFGSDVDIQLEMAVPQPGQYVLVVEYVGEDSHQEMGVAVHTPQRAPQ 1141
Mouse 1142 QGVLNLHPCPYSSLCRSPARDTQHHLAIFYLDSEASIRLTAEQAHFFLHSVTLVPVEEFSTEFVE 1206
Mouse 1207 PRVFCVSSHGTFNPSSAACLASRFPKPPQPIILKDCQVLPLPPDLPLTQSQELSPGAPPEGPQPR 1271
Mouse 1272 PPTAVDPNAEPTLLRHPQGTVVFTTQVPTLGRYAFLLHGYQPVHPSFPVEVLINGGRIWQGHANA 1336
Mouse 1337 SFCPHGYGCRTLVLCEGQTMLDVTDNELTVTVRVPEGRWLWLDYVLIVPEDAYSSSYLQEEPLDK 1401
Mouse 1402 SYDFISHCATQGYHISPSSSSPFCRNAATSLSLFYNNGALPCGCHEVGAVSPTCEPFGGQCPCRG 1466
Mouse 1467 HVIGRDCSRCATGYWGF-----PNCRPCDCGARLCDELTGQCICPPRTVPPDCLVCQPQSFGCHP 1526
Mouse 1527 LVGCEECNCSGPGVQELTDPTCDMDSGQCRCRPNVAGRRCDTCAPGFYGYPSCRPCDCHEAGTMA 1591
Mouse 1592 S-----VCDPLTGQCHCKENVQGSRCDQCRVGTFSLDAANPKGCTRCFCFGATERCGNSNLARHE 1651
Mouse 1652 FVDMEGWVLLSSDR-----QVVPHE-------------------HRPEIELLHA-DLRSVADT-- 1689
Mouse 1690 ----------FSELYWQAPPSYLGDRVSSYGGTLHYEL-----HSETQRGDIFIPYESRPDVVLQ 1739
Mouse 1740 GNQMSI----AFLELAYPPPGQVHRGQLQLVEGNFRHLETHNPVSREELMMVLAGLEQLQIRALF 1800
Mouse 1801 SQTSSSVSLRRVVLEVA--SEAGRGPPASNVELCMCPANYRGDSCQECAPGYYR-----DTKGLF 1858
Mouse 1859 ----LGRCVPCQCHGHSDRCLPGSGICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCVSCPCPL 1919
Mouse 1920 AVPSNNFADGCVLRNGRTQCLCRPGYAGASCERCAPGFFGNPL-VLGSSCQPCDCSGNGDPNMIF 1983
Mouse 1984 SDCDPLTGACRGCLRHTTGPHCERCAPGFYGNALLPGNCTRCDCSPCGTETCDPQSGRCLCKAGV 2048
Mouse 2049 TGQRCDRCLEGYFGFEQCQGCRPCACGPAAKGSECHPQSGQCHCQPGTTGPQCLECAPGYWGLPE 2113
Mouse 2114 KGCRRCQCPRGHCDPHTGHCTCPPGLSGERCDTCSQQHQVPVPGKPGGHGIHCEVCDHCVVLLLD 2178
Mouse 2179 DLERAGALLPAIREQLQGINASS--AAWARLHRLNASIADLQSKLRSPPGPRYQAAQQLQTLEQQ 2241
Mouse 2242 SISLQQDTERLGSQATGVQGQAGQLLDTTESTLGRAQKLLESVR--------AVG----RALNEL 2294
Mouse 2295 ASRMGQGSPGDAL-VPSG-EQLRW---ALAEVERLLWDMR-TRDLG-----AQGAVAEAELAEAQ 2348
Mouse 2349 RLMARVQEQLTSFWEE-NQSLATHIR--------DQLAQYESGLMDLREAL-NQAVNTTREAEEL 2403
Mouse 2404 NSRNQERLKEALQWKQELSQDNATLKATLQAASLILGHVSEL---------LQGI--DQAKEDLE 2457
Mouse 2458 HLAASLDGAWTPLLKRMQAFSPASSKVDLVEAAEAHAQKL----NQLAINLSGIILGINQDRFIQ 2518
Mouse 2519 RAVEASNAYSSILQAVQAAEDA---AGQALRQASRTWEMVVQRGLAAGARQLLANSSALEETILG 2580
Mouse 2581 HQGRLGLAQGRL-----QAAGIQ--LHNVWARKNQLAAQIQ----EAQAMLAMDTSETSEKIAHA 2634
Mouse 2635 KAVAAEALSTATHVQSQLQGMQ---KNVE-RWQSQLGGLQGQDLSQVERDASSSVSTLEKTLPQL 2695
Mouse 2696 LAKLSRLENRG--------VHNASLALSANIGRVRKLIAQARSAASKVKVSMKFNGRSGVRLRTP 2752
Mouse 2753 RDLADLAAY-----------TALKFHIQSPVPAPEPGKNTGDHFVLYMGSRQATGDYMGVSLRNQ 2806
Mouse 2807 KVHWVYRLGKAGPTTLSI---------DENIGEQFAAVSIDRTLQFGHM---------------- 2846
Mouse 2847 -----SVTVEKQMVHEIKGDTVAPGSEGLLNLHPDDFVFYVGGYPSNFTPPEPLRF-PGYLGCIE 2905
Mouse 2906 METLNEEVVSLYNFEQTFMLDTAVDKPCARSK--ATGDPWLTDGSYLDGSGFARISFEKQFSNTK 2968
Mouse 2969 RF---DQELRLVSYNGIIFFL--KQESQFLCLAVQEGTLVLFYDFGSGLKKADPLQPPQALTAAS 3028
Mouse 3029 KAVRQGRGLGMGGPAEKFGF---------------PVPATHPLQIQVFLLAGNRKRVLVRVERAT 3078
Mouse 3079 VFSVDQDNMLEMADAYYLGGVPPEQLPLSLRQLFPSGGS--------VRGCIKGIKALGK-YVDL 3134
Mouse 3135 KRLNTTGISFGCTADLLVGRTMT----FHGHGFLPLALPDVAPITEVVYSGFGFRGTQDNNLLYY 3195
Mouse 3196 RTSP------------DGPYQVSLREG--HVTLR----FMNQEVETQRVFADGAPHYVAFYSNVT 3242
Mouse 3243 GVWLYVDDQLQLVKSHERTTPMLQLQPEEPSRLLLGG-------LPVSGTFHNFSGCISNVFVQR 3300
Mouse 3301 LRGPQRVFDLHQNMGSVNVSVGCT-PAQ----------LIET----------SRATAQKVSRRSR 3344
Mouse 3345 QPSQDLACTTPWLPGTIQDAYQFGGPLPSYLQFVGISPSH--RNRLHLSMLVRPHAASQGLLLST 3407
Mouse 3408 APMSGRSPS--LVLFLNHGHFVAQTEGPGPRLQVQSRQHSRAGQWHRVSVRWGMQQIQLVVDGSQ 3470
Mouse 3471 TWSQKALHHRVPRAERPQPYTLSVGGLPAS--SYSSKLPVSV-GFSGCLKKLQLDK--RPLRTPT 3530
Mouse 3531 QMVGVTPCVSGPLEDGLFFPGSEGVV---TLELPKAKMPYVSLELEMRPLAAAGLIFHLGQALAT 3592
Mouse 3593 PYMQLKVLTEQVLLQANDGAG-----EFSTWVTYPKLCDGRWHRVAVIMGRDTLRLEVDTQSNHT 3652
Mouse 3653 TGRLP-------ESLAG-----SPALLHLGSLPKSSTARPELPA--YRGCLRKLLI 3694 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lama5 | XP_006500638.1 | Laminin_N | 59..303 | CDD:365840 | 83/260 (32%) |
EGF_Lam | 304..352 | CDD:238012 | 23/47 (49%) | ||
EGF_Lam | 363..426 | CDD:238012 | 24/62 (39%) | ||
EGF_Lam | 433..474 | CDD:238012 | 15/40 (38%) | ||
EGF_Lam | 500..547 | CDD:214543 | 17/54 (31%) | ||
EGF_Lam | 546..589 | CDD:238012 | 21/248 (8%) | ||
Laminin_EGF | 593..640 | CDD:365839 | 18/54 (33%) | ||
Laminin_EGF | 638..685 | CDD:365839 | 19/73 (26%) | ||
EGF_Lam | 682..724 | CDD:238012 | 8/41 (20%) | ||
EGF_Lam | 781..832 | CDD:238012 | 13/50 (26%) | ||
EGF_Lam | 833..>872 | CDD:238012 | 17/39 (44%) | ||
Laminin_EGF | 1443..1491 | CDD:365839 | 18/52 (35%) | ||
Laminin_EGF | 1533..1584 | CDD:365839 | 23/50 (46%) | ||
Laminin_EGF | 1582..1630 | CDD:365839 | 21/52 (40%) | ||
Laminin_B | 1694..1830 | CDD:365838 | 41/146 (28%) | ||
EGF_Lam | 1864..>1900 | CDD:238012 | 15/35 (43%) | ||
Laminin_EGF | 1915..1968 | CDD:365839 | 24/53 (45%) | ||
EGF_Lam | 1970..2023 | CDD:238012 | 4/52 (8%) | ||
EGF_Lam | 2025..2069 | CDD:214543 | 15/43 (35%) | ||
EGF_Lam | 2071..2117 | CDD:238012 | 4/45 (9%) | ||
Laminin_EGF | 2119..>2147 | CDD:365839 | 0/27 (0%) | ||
Laminin_I | 2194..2452 | CDD:310534 | 62/303 (20%) | ||
DUF3584 | <2355..>2618 | CDD:378817 | 66/301 (22%) | ||
Laminin_II | 2642..2764 | CDD:368703 | 35/144 (24%) | ||
LamG | 2783..2912 | CDD:214598 | 25/159 (16%) | ||
LamG | 2969..3130 | CDD:214598 | 32/188 (17%) | ||
LamG | 3182..3300 | CDD:214598 | 35/142 (25%) | ||
LamG | 3364..3522 | CDD:238058 | 47/164 (29%) | ||
LamG | 3569..3696 | CDD:214598 | 34/145 (23%) | ||
wb | NP_723870.1 | Laminin_N | 164..396 | CDD:278484 | 83/256 (32%) |
EGF_Lam | 401..450 | CDD:238012 | 23/55 (42%) | ||
TNFRSF | <407..507 | CDD:304602 | 48/122 (39%) | ||
EGF_Lam | 505..552 | CDD:238012 | 17/68 (25%) | ||
Laminin_EGF | 550..597 | CDD:278482 | 16/51 (31%) | ||
Laminin_B | 660..798 | CDD:278481 | 0/137 (0%) | ||
EGF_Lam | 851..900 | CDD:238012 | 16/49 (33%) | ||
Laminin_EGF | <943..971 | CDD:278482 | 11/27 (41%) | ||
VSP | 953..1414 | CDD:146106 | 192/1007 (19%) | ||
Laminin_EGF | 974..1018 | CDD:278482 | 23/98 (23%) | ||
EGF_Lam | 1017..1065 | CDD:238012 | 14/52 (27%) | ||
Laminin_EGF | 1065..>1105 | CDD:278482 | 17/63 (27%) | ||
EGF_Lam | 1150..1197 | CDD:238012 | 22/296 (7%) | ||
Laminin_EGF | 1199..1247 | CDD:278482 | 16/47 (34%) | ||
EGF_Lam | 1247..1292 | CDD:238012 | 15/44 (34%) | ||
Laminin_EGF | 1294..1342 | CDD:278482 | 23/50 (46%) | ||
Laminin_EGF | 1340..1392 | CDD:278482 | 21/52 (40%) | ||
Laminin_B | 1486..1611 | CDD:278481 | 39/131 (30%) | ||
EGF_Lam | 1669..1716 | CDD:238012 | 20/48 (42%) | ||
Laminin_EGF | 1718..1767 | CDD:278482 | 24/50 (48%) | ||
EGF_Lam | 1772..1819 | CDD:238012 | 23/146 (16%) | ||
CrfC | <1933..2267 | CDD:223771 | 86/379 (23%) | ||
Laminin_II | 2277..2400 | CDD:283628 | 35/139 (25%) | ||
LamG | 2399..>2492 | CDD:304605 | 23/116 (20%) | ||
Laminin_G_2 | 2616..2755 | CDD:280389 | 32/180 (18%) | ||
Laminin_G_2 | 2804..2944 | CDD:280389 | 35/146 (24%) | ||
Laminin_G_2 | 3038..3169 | CDD:280389 | 37/134 (28%) | ||
LamG | 3192..3347 | CDD:238058 | 39/169 (23%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 72 | 1.000 | Domainoid score | I9300 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100395 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10574 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
6 | 5.770 |