Sequence 1: | XP_006500638.1 | Gene: | Lama5 / 16776 | MGIID: | 105382 | Length: | 3745 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
Alignment Length: | 3984 | Identity: | 1253/3984 - (31%) |
---|---|---|---|
Similarity: | 1864/3984 - (46%) | Gaps: | 613/3984 - (15%) |
- Green bases have known domain annotations that are detailed below.
Mouse 50 LHPPYFNLAEGARITASATCGEEAPTRSVSRPTEDLYCKLVGGPVAGGDPN-QTIQGQYCDICTA 113
Mouse 114 ANSNKAHPVSNAIDGTERWWQSPPLSRGLEYNEVNVTLDLGQVFHVAYVLIKFANSPRPDLWVLE 178
Mouse 179 RSTDFGHTYQPWQFFASSKRDCLERFGPRTLERITQDDDVICTTEYSRIVPLENGEIVVSLVNGR 243
Mouse 244 PGALNFSYSPLLRDFTKATNIRLRFLRTNTLLGHLMGKALRDPTVTRRYYYSIKDISIGGRCVCH 308
Mouse 309 GHADVCDAKDPLDPFR-LQCACQHNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYD 372
Mouse 373 CYYDPEVDRRNASQNQDNVYQGGGVCLDCQHHTTGINCERCLPGFFRAPDQPLDSPHVCRPCDCE 437
Mouse 438 SDFTDGTCEDLTGRCYCRPNFTGELCAACAEGYTDFPHCYPLPSFPHNDTREQVLPAGQIVNCDC 502
Mouse 503 NAAGTQGNACRKDPRLGRCVCKPNFRGAHCELCAPGFHG-PSCHPCQCSSPGVANSLCDPESGQC 566
Mouse 567 MCRTGFEGDRCDHCALGYFHFPLCQLCGCSPAGTLPEGCD-EAGRCQCRPGFDGPHCDRCLPGYH 630
Mouse 631 GYPDCHACACDPRGALDQQCGVGGLCHCRPGYTGATCQECSPGFYGFPSCIPCHCSADGSLHTTC 695
Mouse 696 DPTTGQCRCRPRVTGLHCDMCVPGAYNFPYCEAGSCHPAGLA---PANPALPETQAPCMCRAHVE 757
Mouse 758 GPSCDRCKPGYWGLSASNPEGCTRCSCDPRGTLGGVTECQG-NGQCFCKAHVCGKTCAACKDGFF 821
Mouse 822 GLDYADYFGCRSCRCDVGGALGQGCEPKTGACRCRPNTQGPTCSEPAKDHYLPDLHHMRLELEEA 886
Mouse 887 ATPEGHAVRFGFNPLEFENFSWRGYAHMMAIQPRIVARLNVTSPDLFRLVFRYVNRGSTSVNGQI 951
Mouse 952 SVREEGKLSSCTNCTEQSQPVAFPPSTEPAFVTV--PQRGFGEPFVLNPGIWALLVEA-EGVLLD 1013
Mouse 1014 YVVLLPSTYYEAALLQHRVTEACTYRPSALHSTENCLVYAHLPLDGFPSAAGTEALCRHDNSLPR 1078
Mouse 1079 PCPTEQLSPSH----------PPLATCFGSDVDIQLEMAVPQPGQYVLVVEYVGE----DSHQEM 1129
Mouse 1130 GVAVHTPQRAPQQGVLNLHPCPYSSLCRSPARDTQHHLAIFYLDSE--ASIRLTA---EQAHFFL 1189
Mouse 1190 HSVTLVPVEEFSTEFVEPRVFCVSSHGTFNPSSAACLASRFPKPPQPIILKDCQVLPLPPDLPLT 1254
Mouse 1255 QSQELSPGAPPEGPQPRPPTAVDPNAEPTLLRH----PQGTVVFTTQV----PTLGRYAFLLHGY 1311
Mouse 1312 QPVHPSFPVEVLINGGR-IWQGHANASFCPHGYGCRTLVLCEGQTMLDVTDNELTVTVRVPEGRW 1375
Mouse 1376 LWLDYVLIVPEDAYSSSYLQEEPLDKSYDFISHCATQGYHISPSSSSPFCRNAATSLSLFYNNGA 1440
Mouse 1441 LPCGCHEVGAVSPTCEPFGGQCPCRGHVIGRDCSRCATGYWGFPNCRPCDC-GARLCDELTGQCI 1504
Mouse 1505 CPPRTVPPDCLVCQPQSFGCHPLVGCEECNCSGPGVQELTDPTCDMDSGQCRCRPNVAGRRCDTC 1569
Mouse 1570 APGFYGYPSCRPCDCHEAGTMASVCDPLTGQCHCKENVQGSRCDQCRVGTFSLDAANPKGCTRCF 1634
Mouse 1635 CFGATERCG-------NSNLARH------EFVDMEGWVLLSSDRQVVPHEHRPEIEL----LHAD 1682
Mouse 1683 --LRSVADTFSELYWQAPPSYLG---------DRVSSYGGTLHYELHSETQRGDIFIPYESRPDV 1736
Mouse 1737 VLQGNQMSIAFLELAYPPPGQVHRGQLQLVEGNFRHLETHNPVSREELMMVLAGLEQLQIRALFS 1801
Mouse 1802 QTSSSVSLRRVVLEVASEAGRGPPASN---VELCMCPANYRGDSCQECAPGYYRDTKGLFLGRCV 1863
Mouse 1864 PCQCHGHSDRCLPGSGICVGCQHNTEGDQCERCRPGFVSSDPSNPASPCVSCPCPLAVPSNNFAD 1928
Mouse 1929 GCVLRNGRTQ--CLCRPGYAGASCERCAPGFFGNPLVLGSSCQPCDCSGNGDPNMIFSDCDPLTG 1991
Mouse 1992 ACRGCLRHTTGPHCERCAPGFYGNALLPGNCTRCDCSPCGTETCDPQSGRCLCKAGVTGQRCDRC 2056
Mouse 2057 LEGYFGFEQCQGCRPCACGPAAKGSECHPQSGQCHCQPGTTGPQCLECAPGYWGLPEKGCRRCQC 2121
Mouse 2122 PRGH-----CDPHTGHCTCPPGLSGERCDTCSQQHQVPVPGKPGGHGIHCEVCDHCVVLLLDDLE 2181
Mouse 2182 RAGALLPAIREQLQGINASSAAWARLHRLN-----ASIADLQSKLRSPPGPRYQAAQQLQTLEQQ 2241
Mouse 2242 SISLQQDTERLGSQATGVQGQAGQLLDTTESTLGRAQKLLESVRAVGRALNELASRMGQGSPGDA 2306
Mouse 2307 LVPSGEQLRWALAEVERLLWDMRTRDLGAQGAV-AEAELAEAQRLMARVQ-------------EQ 2357
Mouse 2358 LTSFWEENQSLATHIRDQ---LAQYESGLMDLREALNQAVNTTREAEELNSRNQERLKEALQWKQ 2419
Mouse 2420 ELSQDNATLKATLQA-------------ASLILGHVSELLQGIDQAKEDLEHLAASLDGAWTPLL 2471
Mouse 2472 KRMQAFSPASSKVDLVEAAEAHAQKLNQLAINLSGIILG-INQDRFIQRAVEASNAYSSILQAVQ 2535
Mouse 2536 AAEDAAGQALRQASRTWEM---VVQRGLAA--GARQLLANS-SALEETILGHQGRLGLAQGRLQA 2594
Mouse 2595 AGIQLHNVWARKNQLAAQIQEAQAMLAMDTSETSEKI-AHAKAVAAEALSTATHVQSQLQGMQKN 2658
Mouse 2659 VERWQSQLGG------LQGQDLSQVER---DASSSVSTLEKTLPQLLAKLSRLENRGVHNASLAL 2714
Mouse 2715 SANIGRVRKLIAQARSAASKVKVSMKFNGRSGVRLRTPRDLADLAAYTALKFHIQSPVPAPEPGK 2779
Mouse 2780 NTGDHFVLYMG----SRQATGDYMGVSLRNQKVHWVYRLGKAGPTTLSIDENI--GEQFAAVSID 2838
Mouse 2839 RTLQFG-HMSVTVEKQMVHEIKGDTVAPGSEGLLN-----LHPD-DFVFYVGGYP--SNFTPPEP 2894
Mouse 2895 LRFPGYLGCIEMETLNEEVVSLYNF-----------EQTFMLDTAVDKPCARSKATGDPWLTDGS 2948
Mouse 2949 YLDGSGFARISFEKQFSNTKRFDQELRLVSYNGIIFFLKQESQFLCLAVQEGTLVLFYDFGSGLK 3013
Mouse 3014 KADPLQPPQALTAASKAVRQGRGLGMGGPAEKFGFPVPATHPLQIQVFLLAGNRKRVL----VRV 3074
Mouse 3075 ERATVFSVDQDNMLEMADAYYLGGVPPE-QLPLSLRQLFPSGGSVRGCIKGIKALGKYVDLKRLN 3138
Mouse 3139 T-TGISFGCTADLLVGRTMTFHGHGFLPLALPDVAPITEVVYSGFGFRGTQDNNLLYYRTSPD-- 3200
Mouse 3201 GPYQVSLREGHVTLRFM-NQEVETQRVFADGAPHYVAFYSNVTGVWLYVDDQLQLVKSHERTTPM 3264
Mouse 3265 LQLQP--EEPSRLLLGGLP--------VSGTFHNFSGCISNVFVQRLRGPQRVFDL----HQNMG 3315
Mouse 3316 SVNVSVGC--------------------------------------------------------- 3323
Mouse 3324 ---------------TPAQLI-----ETSRATAQKVSRRSRQPSQ-----DLACTTPWLPGTIQD 3363
Mouse 3364 AYQFGGPLPSYLQFVGISPSHRNRLHLSML---VRPH---------AASQGLLLSTAPMSGRSPS 3416
Mouse 3417 LVLFLNHGHFVAQTEGPGPRLQ--VQSRQHSRAGQWHRVSVRWGMQQIQLVVDGSQTWSQKALHH 3479
Mouse 3480 RVPRAERPQP-----YTLSVGGL---------PASSYSSKLPVSVGFSGCLKKLQLDKRPLRTPT 3530
Mouse 3531 QMVGVTPCVSGPLEDGLFFPGSEGVVTL--------ELPKAKMPYVSLELEMRPLAAAGLIF--H 3585
Mouse 3586 LGQALA-------TPYMQLKVLTEQVLLQANDGAGEFSTWVTYP---KLCDGRWHRVAVIMGRDT 3640
Mouse 3641 LRLEVD-TQSNHTTGRLPESLAGSPALLHLGS------LPKSSTARPELPAYRGCLRKLLINGAP 3698
Mouse 3699 VNVTASVQIQGAVGMRGCP 3717 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lama5 | XP_006500638.1 | Laminin_N | 59..303 | CDD:365840 | 137/244 (56%) |
EGF_Lam | 304..352 | CDD:238012 | 30/48 (63%) | ||
EGF_Lam | 363..426 | CDD:238012 | 30/62 (48%) | ||
EGF_Lam | 433..474 | CDD:238012 | 18/40 (45%) | ||
EGF_Lam | 500..547 | CDD:214543 | 21/47 (45%) | ||
EGF_Lam | 546..589 | CDD:238012 | 16/42 (38%) | ||
Laminin_EGF | 593..640 | CDD:365839 | 25/47 (53%) | ||
Laminin_EGF | 638..685 | CDD:365839 | 16/46 (35%) | ||
EGF_Lam | 682..724 | CDD:238012 | 19/41 (46%) | ||
EGF_Lam | 781..832 | CDD:238012 | 22/51 (43%) | ||
EGF_Lam | 833..>872 | CDD:238012 | 14/38 (37%) | ||
Laminin_EGF | 1443..1491 | CDD:365839 | 24/47 (51%) | ||
Laminin_EGF | 1533..1584 | CDD:365839 | 19/50 (38%) | ||
Laminin_EGF | 1582..1630 | CDD:365839 | 24/47 (51%) | ||
Laminin_B | 1694..1830 | CDD:365838 | 39/147 (27%) | ||
EGF_Lam | 1864..>1900 | CDD:238012 | 21/35 (60%) | ||
Laminin_EGF | 1915..1968 | CDD:365839 | 26/54 (48%) | ||
EGF_Lam | 1970..2023 | CDD:238012 | 27/52 (52%) | ||
EGF_Lam | 2025..2069 | CDD:214543 | 22/43 (51%) | ||
EGF_Lam | 2071..2117 | CDD:238012 | 18/45 (40%) | ||
Laminin_EGF | 2119..>2147 | CDD:365839 | 15/32 (47%) | ||
Laminin_I | 2194..2452 | CDD:310534 | 55/292 (19%) | ||
DUF3584 | <2355..>2618 | CDD:378817 | 61/298 (20%) | ||
Laminin_II | 2642..2764 | CDD:368703 | 31/130 (24%) | ||
LamG | 2783..2912 | CDD:214598 | 40/143 (28%) | ||
LamG | 2969..3130 | CDD:214598 | 30/165 (18%) | ||
LamG | 3182..3300 | CDD:214598 | 38/130 (29%) | ||
LamG | 3364..3522 | CDD:238058 | 39/185 (21%) | ||
LamG | 3569..3696 | CDD:214598 | 31/145 (21%) | ||
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | 145/253 (57%) |
EGF_Lam | 272..>314 | CDD:238012 | 26/41 (63%) | ||
EGF_Lam | 332..389 | CDD:238012 | 29/56 (52%) | ||
EGF_Lam | 402..443 | CDD:238012 | 18/40 (45%) | ||
EGF_Lam | 448..491 | CDD:238012 | 19/43 (44%) | ||
Laminin_EGF | 495..543 | CDD:278482 | 19/47 (40%) | ||
Laminin_EGF | 541..589 | CDD:278482 | 25/47 (53%) | ||
Laminin_EGF | 587..634 | CDD:278482 | 16/46 (35%) | ||
EGF_Lam | 631..673 | CDD:238012 | 20/42 (48%) | ||
Laminin_EGF | 677..729 | CDD:278482 | 19/52 (37%) | ||
Laminin_EGF | 732..782 | CDD:278482 | 21/49 (43%) | ||
EGF_Lam | 785..828 | CDD:238012 | 16/42 (38%) | ||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | 47/139 (34%) | ||
Laminin_EGF | 1375..1423 | CDD:278482 | 24/47 (51%) | ||
EGF_Lam | 1420..1457 | CDD:238012 | 13/36 (36%) | ||
Laminin_EGF | 1466..1516 | CDD:278482 | 19/50 (38%) | ||
Laminin_EGF | 1514..1562 | CDD:278482 | 24/47 (51%) | ||
LamB | 1632..1760 | CDD:214597 | 38/139 (27%) | ||
Laminin_EGF | <1775..1801 | CDD:278482 | 15/25 (60%) | ||
EGF_Lam | 1808..1851 | CDD:238012 | 22/42 (52%) | ||
EGF_Lam | 1859..1907 | CDD:214543 | 24/47 (51%) | ||
EGF_Lam | 1916..1968 | CDD:238012 | 27/52 (52%) | ||
EGF_Lam | 1969..2015 | CDD:238012 | 23/45 (51%) | ||
EGF_Lam | 2016..>2054 | CDD:238012 | 16/37 (43%) | ||
EGF_Lam | 2063..>2097 | CDD:238012 | 15/33 (45%) | ||
Laminin_I | 2129..2385 | CDD:283627 | 54/293 (18%) | ||
Tar | 2278..2662 | CDD:223910 | 84/405 (21%) | ||
Laminin_II | 2566..2700 | CDD:283628 | 34/138 (25%) | ||
LamG | 2674..2843 | CDD:238058 | 49/185 (26%) | ||
LamG | 2878..3029 | CDD:238058 | 38/199 (19%) | ||
LamG | 3078..3205 | CDD:214598 | 40/142 (28%) | ||
LamG | 3349..3512 | CDD:238058 | 39/181 (22%) | ||
LamG | 3535..3689 | CDD:238058 | 37/175 (21%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 301 | 1.000 | Domainoid score | I1408 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H4060 | |
Inparanoid | 1 | 1.050 | 1791 | 1.000 | Inparanoid score | I65 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG45870 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0003375 | |
OrthoInspector | 1 | 1.000 | - | - | oto95121 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2298 |
SonicParanoid | 1 | 1.000 | - | - | X3259 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
12 | 11.860 |