Sequence 1: | NP_034811.2 | Gene: | Lama4 / 16775 | MGIID: | 109321 | Length: | 1816 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_723870.1 | Gene: | wb / 43946 | FlyBaseID: | FBgn0261563 | Length: | 3375 | Species: | Drosophila melanogaster |
Alignment Length: | 1949 | Identity: | 449/1949 - (23%) |
---|---|---|---|
Similarity: | 782/1949 - (40%) | Gaps: | 450/1949 - (23%) |
- Green bases have known domain annotations that are detailed below.
Mouse 71 FFRTLSGECAPCDCNGNSHECLDGSGFCLHCQRNTTGEHCEKCLDGYIGDSIRGTPRFCQPCPCP 135
Mouse 136 LPHLANFAESCYRKNGAVRCICKENYVGPNCERCAPGYYGNPLLI-GSTCKKCDCSGNSDPNLIF 199
Mouse 200 EDCDEITGQCRNCLRNTTGFKCERCAPGYYGDARTAKNCAVCNCGGGPCDSVTGECLEEGFEVPT 264
Mouse 265 GCDKCVWDLTDDLRLAALSIEESKSGLLSVSSGAAAHRHVTDMNST-IHLLRTRLSERENQY--- 325
Mouse 326 ---------TLRKIQINNSENTLRSLLPDVEGLHEKGSQASRKGM-LVEKESMDTIDQATHLVEQ 380
Mouse 381 AHN---MRDKIQEINSKMLYYGENQEL--GPEEIAEKLVLAQ------KMLEEIRSR-----QPF 429
Mouse 430 LTHRELVDEEADEA--QELLSQAENWQRLHNDTRSLFPVVLEQLDDYNAKLSDLQESINQA---L 489
Mouse 490 DHVRDAEDMNRAITFKQRDHEKQHERVKEQMEVVGASLSMSADSLTIPQLTLEELDEIIKNASGI 554
Mouse 555 YAEIDGAKNELQGKLSNLSNLSHDL----VQEATDHAYNLQQEADELSRNLHSSDMNGLVQKALD 615
Mouse 616 ASNVYENIANYVSEANETAELALNITDRIYDAVSGIDTQIIYHKDESDNL------LNQARELQA 674
Mouse 675 KA----DSSN--DEAVADTSRRVGGALWRKGALRD---RLNDAVKQLQAAERGDAHQRLGQSKLF 730
Mouse 731 IEEANKT---TAAVQQVTTPMANNLSNWSQNLQTFDSSAYNTAVDSARDAVRNLTEVVPQLLD-Q 791
Mouse 792 LRTVEQKRPA---------SNISASIQRIRELIAQTRSVASKIQVSMMFDGQSAVEVHPKVSV-- 845
Mouse 846 ---DDLKAFTSISLYMKPPPKPAEPTGAWVADQFVLYLGSKNAKKEYMGLAIKNDNLVYVYNLGM 907
Mouse 908 KDVEI-------LLDSKPVSSWPAYF----------SIVKIERVGKHGKVFLTVPS------LSS 949
Mouse 950 TAEEKF-------IKKGEFAGDDSLLDLTPEDTVFYVGGVPANFKLPASLNLPSYSGCLELATLN 1007
Mouse 1008 NDVISLYNFKHIYNMDPSKSVPCARDKLAFTQSRAAS--YFFDGSSYAVVRDI----TRRGKFG- 1065
Mouse 1066 QVTRFDIEIRTPADNGLVLLMVN--GSMFFSLEMRNGYLHVFYDFGFSNGPVHLEDTLKKAQIND 1128
Mouse 1129 AKYH------------EISIIYHNDKKMILVVDRRHVKSTDNEKKKIPF------TDIYIGGAPQ 1175
Mouse 1176 EVLQSRTLRAHLP-LDINFRGCMKGFQFQKKDFNLLEQTETLGVGYGCPEDSLISRRAYFNGQSF 1239
Mouse 1240 I----ASIQKISFFDGFEGGFNFRTLQPNGLLFYYTSGSDV------------FSISLDNGTVVM 1288
Mouse 1289 DVKG----IKVMSTDKQYHDGLPHFVVTSISDTRYELVVDKS-----RLRGKNPTKGKAEQTQTT 1344
Mouse 1345 EKKFYFGG-------SPISPQYANFTGCISNAYFTRLDRDVEVEDFQRYSE-----------KVH 1391
Mouse 1392 TSLYECPIESSPLFLLHKKGKNSSKPKTNKQGEKSKDAPSWDPIGLKFLEQKAPRDSHCHLSSSP 1456
Mouse 1457 RAIEHAYQYGGTANSRQEFEHEQGDFGEKSQFAIRLKTRS--SHGMIFYV--SDQEENDFMTLFL 1517
Mouse 1518 AHGRLVFMFNVGHKKLKIRSQEKYNDGLWHDVIF---------------IREKSSGRLVIDGLRV 1567
Mouse 1568 LEERLPPSGAAWKIKGPIYLGGV--APGRAVKNVQITSVYSFSGCLGNLQLNG--ASITSASQTF 1628
Mouse 1629 SVTPCFEGPMETGTYFSTEGGYVVLDESFNIGLKFEIAFEVRPRSSSGTLVHGHSVNG-EYLNVH 1692
Mouse 1693 MRNGQVIVKV---NNGVRDFSTSVTPKQNLCDGRWHRITVIRDSNVVQLDVDS--EVNHVVGPLN 1752
Mouse 1753 PKPVDHREPVFVGGVPESLLTPRLAPSKPFTGCIRHFVI-----------DSRPVSFSKAALVS 1805 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lama4 | NP_034811.2 | EGF_Lam | 81..130 | CDD:238012 | 20/48 (42%) |
EGF_Lam | 131..185 | CDD:238012 | 24/54 (44%) | ||
EGF_Lam | 187..238 | CDD:238012 | 13/50 (26%) | ||
Domain II and I | 256..825 | 134/635 (21%) | |||
Laminin_I | 289..547 | CDD:283627 | 59/292 (20%) | ||
ApoLp-III_like | 610..787 | CDD:304399 | 43/194 (22%) | ||
Cell attachment site. /evidence=ECO:0000255 | 717..719 | 0/1 (0%) | |||
Laminin_II | 727..854 | CDD:283628 | 26/144 (18%) | ||
LamG | 853..1008 | CDD:214598 | 32/184 (17%) | ||
LamG | 1044..1202 | CDD:238058 | 45/185 (24%) | ||
LamG | 1232..1371 | CDD:238058 | 46/170 (27%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1409..1433 | 5/23 (22%) | |||
LamG | 1482..1617 | CDD:238058 | 32/155 (21%) | ||
LamG | 1641..1792 | CDD:238058 | 49/167 (29%) | ||
wb | NP_723870.1 | Laminin_N | 164..396 | CDD:278484 | |
EGF_Lam | 401..450 | CDD:238012 | |||
TNFRSF | <407..507 | CDD:304602 | |||
EGF_Lam | 505..552 | CDD:238012 | |||
Laminin_EGF | 550..597 | CDD:278482 | |||
Laminin_B | 660..798 | CDD:278481 | |||
EGF_Lam | 851..900 | CDD:238012 | |||
Laminin_EGF | <943..971 | CDD:278482 | |||
VSP | 953..1414 | CDD:146106 | |||
Laminin_EGF | 974..1018 | CDD:278482 | |||
EGF_Lam | 1017..1065 | CDD:238012 | |||
Laminin_EGF | 1065..>1105 | CDD:278482 | |||
EGF_Lam | 1150..1197 | CDD:238012 | |||
Laminin_EGF | 1199..1247 | CDD:278482 | |||
EGF_Lam | 1247..1292 | CDD:238012 | |||
Laminin_EGF | 1294..1342 | CDD:278482 | |||
Laminin_EGF | 1340..1392 | CDD:278482 | |||
Laminin_B | 1486..1611 | CDD:278481 | |||
EGF_Lam | 1669..1716 | CDD:238012 | 20/48 (42%) | ||
Laminin_EGF | 1718..1767 | CDD:278482 | 23/49 (47%) | ||
EGF_Lam | 1772..1819 | CDD:238012 | 15/74 (20%) | ||
CrfC | <1933..2267 | CDD:223771 | 79/371 (21%) | ||
Laminin_II | 2277..2400 | CDD:283628 | 24/124 (19%) | ||
LamG | 2399..>2492 | CDD:304605 | 16/111 (14%) | ||
Laminin_G_2 | 2616..2755 | CDD:280389 | 36/151 (24%) | ||
Laminin_G_2 | 2804..2944 | CDD:280389 | 41/145 (28%) | ||
Laminin_G_2 | 3038..3169 | CDD:280389 | 31/145 (21%) | ||
LamG | 3192..3347 | CDD:238058 | 48/155 (31%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100395 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
4 | 3.670 |