Sequence 1: | NP_032507.2 | Gene: | Lama2 / 16773 | MGIID: | 99912 | Length: | 3118 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_723870.1 | Gene: | wb / 43946 | FlyBaseID: | FBgn0261563 | Length: | 3375 | Species: | Drosophila melanogaster |
Alignment Length: | 3487 | Identity: | 997/3487 - (28%) |
---|---|---|---|
Similarity: | 1541/3487 - (44%) | Gaps: | 675/3487 - (19%) |
- Green bases have known domain annotations that are detailed below.
Mouse 34 GLFPAVLNLASNALITTNATCGEKGPEMYCKLVEHVPGQPVRNPQCRICNQNSSNPYQRHPITNA 98
Mouse 99 IDG----------KNTWWQSPSIKNGVEYHYVTITLDLQQVFQIAYVIVKAANSPRPGNWILERS 153
Mouse 154 LDDVEYKPWQYHAVTDTECLTLYNIYPRTGPPSYAKDDEVICTSFYSKIHPLENGEIHISLINGR 218
Mouse 219 PSADDPSPELLEFTSARYIRLRFQRIR-TLNADLMMFAHKDPREID-----PIVTRRYYYSVKDI 277
Mouse 278 SVGGMCICYGHARACPLDPATNKSRCECEHNTCGESCDRCCPGFHQKPWRAGTFLTKSECEACNC 342
Mouse 343 HGKAEECYYDETVASRNLSLNIHGKYIGGGVCINCTHNTAGINCETCVDGFFRPKGVSPNYPRPC 407
Mouse 408 QPCHCDPTGSLSEVCVKDEKYAQRGLKPGSCHCKTGFGGVNCDRCVRGYHGYPDCQPCNC---SG 469
Mouse 470 LGSTNEDPCVGPCSCKENVEGEDCSRCKSGFFNLQEDNQKGCEECFCSGVSNRCQSSYWTYGNIQ 534
Mouse 535 DMRGWYLTDL-------------SGRIRMAPQLDNPDSPQQISISNSEARKSLLDGYYWSAPPPY 586
Mouse 587 LGNRLPAVGGQLSFTISYDLEEEEDDTEKILQLMIIFEG-NDLRI--------------STAYKE 636
Mouse 637 V---YLEPSEEHIEEVSLKEEAFTIHGTNLPVTRKDFMIVLTNLERVLMQITYNLGMDAIFRLSS 698
Mouse 699 VNLESAVPY----PTDRRIATDVEVCQCPPGYSGSSCETCWPRHRRV-NGTIFGGI---CEPCQC 755
Mouse 756 FAHAEACDDITGECLNCKDHTGGPYCNECLPGFYGDPTRGSPEDCQPCACPLNIPSNNFSPTCHL 820
Mouse 821 D--------------RSLGLICDECPIGYTGPRCERCAEGYFGQPSIPGGSCQPCQC-------- 863
Mouse 864 -----------------NDNLDY-----------------SIPGSCDSLSGSCLI---------- 884
Mouse 885 -------------------------------------CKPGTTGRYCELCADGYFG-DAV----- 906
Mouse 907 -------------------------NAKN---CQPCRCNINGSFSEICHTRTGQCECRPNVQGRH 943
Mouse 944 CDECKPETFGLQLGRGCLPCNCNSFGSKSFDCEA-SGQCWCQPGVAGKKCDRCAHGYFNFQEGGC 1007
Mouse 1008 IACD-CSHLGNNCDPKTGQCICPPNTTGEKCSECLPNTWGHSIVTGCKVCNCSTVGSLASQCNVN 1071
Mouse 1072 TGQCSCHPKFSGMKCSECSRGHWNYPLCTLCDCFLPGTDATTCDLETRKCSCSDQTGQCSCKVNV 1136
Mouse 1137 EGVHCDRCRPGKFGLDAKNPLGCSSCYCFGVTSQCSEAKGLIRTW--VTLSDEQTI--------- 1190
Mouse 1191 LPLVD-EALQHTTTKGIAFQKPEI-VAKMDEVR---------------QELHLEPFYWKLPQQFE 1238
Mouse 1239 GKKLMAYGGKLKYAIYFEARDETGFATYKP-QVIIRGGTPTHARIITRHMAAPLIGQL------- 1295
Mouse 1296 ----TRHEIEMTEKEWKYYGDDPRISRTVTREDFLDILYDIHYILIK----ATYGNVVRQSRISE 1352
Mouse 1353 ISMEVAEPGHVLAGSPPAHLIERCDCPPGYSGLSCETCAPGFYRLRS---------EPGGRTPGP 1408
Mouse 1409 TLGTCVPCQCNGHSSQCDPETSVCQNCQHHTAGDFCERCALGYYGIVRGLPNDCQPCACPLISPS 1473
Mouse 1474 NNFSPSC-VLEGLEDYRCTACPRGYEGQYCERCAPGYTGSPSS-PGGSCQECECDPYGSLPVPCD 1536
Mouse 1537 RVTGLCTCRPGATGRKCDGC--EHWHAREGAECVFCGDECTGLLLGDLA----RLEQMTMNINLT 1595
Mouse 1596 GPLPAPYKILYGLENTTQ----------ELKHLLSPQRAPERLIQLAEGNVNTLVMETNELLTRA 1650
Mouse 1651 TKVTADGEQTGQDAERTNSRAESLEEFIKGLVQDAEAINEKAVQLNETLGNQDKTAERNLEELQK 1715
Mouse 1716 EIDRMLKELRSKDLQTQKEV-----AEDELVAAEGLLKRVNKLFGEPRAQNEDMEKDLQQ---KL 1772
Mouse 1773 AEYKNKLDDAWDLLREATDKTRDANRLSAANQKNMTILETKKEAIEGSKRQIENTLKEGNDILDE 1837
Mouse 1838 ANRLL-----------GEINSVIDYVDDIKTKLPPMSEELSDKIDDLAQEIKDRRLAEKVFQAES 1891
Mouse 1892 HAAQLNDSSAVLDGILDEAKNISFNATAAFRAYSNIKDYIDEAEKVAREAKELAQGATK-LATSP 1955
Mouse 1956 QGLLKEDAKGSLQKSFRILNEAKKLANDVKGNHNDLNDLKTRLETADLRNSGLLGALNDTMDKLS 2020
Mouse 2021 AITNDTAAKLQAVKEKA--REANDT----------AKAVLAQVKDLHQNLDGLKQNYNKLAD--- 2070
Mouse 2071 ----------SVAKTNAVVKDPSKNKIIADAGTSVRNLEQEADRLIDKLKPIKELEDN-LKKNIS 2124
Mouse 2125 EIKELINQARKQANSIKVSVSS-GGDCVRTYRPEIKKGSYNNIVVHVKTAVADNL----LFYLGS 2184
Mouse 2185 AKFIDFLAIEMRKGKVSFLWDVGSGVGRVEYP------DLTIDDSYWYRIEASRTGRNGSISVRA 2243
Mouse 2244 LDGPKASMVPSTYHSVSPPGYTIL--DVDANAMLF---------VGGLTGK-IKKADAVRVITFT 2296
Mouse 2297 GCMGETYFDNKPIGLWNFREKEGDCKGCTVSPQVEDSEGTIQ-FDGEGYA--LVSRPIRWYPNIS 2358
Mouse 2359 TVMFKFRTFSSSALLMYLATRDLKD-FMSVELSDGHVKVSYDLG-SGMTSVVSNQNHNDGKWKAF 2421
Mouse 2422 TLSR---IQKQANISIVDIDSNQEENVATSSSGNNFGLDLKADDKIYFGGLPTLRNLSMKARPEV 2483
Mouse 2484 NVKKYSGCLKDIEISRTPYNILSSPDYVGVTKGCSLENVYT-VSFPKPGFVELAAVSIDVGTEIN 2547
Mouse 2548 LSFSTRNESGIILLGSGGTLTPPR---RKRRQTTQAYYAIFLNKGRLEVHLSSGTRTMRKIVIKP 2609
Mouse 2610 EPN--LFHDGREHSVHVERTRGIFTVQIDEDRRHMQNLTEEQ-----PIEVKKLFVGGAPPEFQP 2667
Mouse 2668 SPLRNIPAF---QGCVWNLVINSIPMDFAQPIAFKNADIGRCTYQKPREDESEAVPAEVIVQPQP 2729
Mouse 2730 VPTPAFPFPAPTMVHGPCVAESEPALLTGSKQFGLSRNSHIAIAFDD-------TKVKNR----- 2782
Mouse 2783 -LTIELEVRTEAESGLLFYM--ARINHADFATVQLRNGFPYFSYDL-----GSGDTSTMIPTKIN 2839
Mouse 2840 DGQWHKIKIVRVKQEGILYVD------DASSQTISPKKADILDVVGILYVGGLPINYTTRRIGPV 2898
Mouse 2899 TYSLD---------GCVRNLHMEQAPVDLDQPTSSFHVGTCFANAESGTYFDGTGFAKAVGGFKV 2954
Mouse 2955 GLDLLVEFEFRTTRPTGVLLGVSSQK-MDGMGIEMIDEKLMFHVDNGAGRFTAIYDAGIPGH--M 3016
Mouse 3017 CNGQWHKVTAKKIKNRLELVVD--------GNQVDAQSPNSASTSADTNDPVFVGGFPGGLNQFG 3073
Mouse 3074 LTTNIRFRGCIRSLKLTKGTGKPLEVNFAKALELRGVQPVSC 3115 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lama2 | NP_032507.2 | Laminin_N | 45..281 | CDD:278484 | 99/251 (39%) |
EGF_Lam | 283..330 | CDD:238012 | 18/46 (39%) | ||
Laminin_EGF | 410..467 | CDD:278482 | 22/56 (39%) | ||
Laminin_EGF | 465..511 | CDD:278482 | 22/48 (46%) | ||
Laminin_B | 579..707 | CDD:278481 | 38/145 (26%) | ||
EGF_Lam | 752..801 | CDD:238012 | 20/48 (42%) | ||
EGF_Lam | 802..859 | CDD:238012 | 31/70 (44%) | ||
EGF_Lam | 860..912 | CDD:238012 | 26/174 (15%) | ||
EGF_Lam | 913..960 | CDD:238012 | 22/46 (48%) | ||
EGF_Lam | 963..1007 | CDD:214543 | 17/44 (39%) | ||
EGF_Lam | 1009..1054 | CDD:238012 | 20/45 (44%) | ||
Laminin_EGF | 1056..1104 | CDD:278482 | 20/47 (43%) | ||
Laminin_EGF | 1102..1159 | CDD:278482 | 23/56 (41%) | ||
LamB | 1225..1360 | CDD:214597 | 36/150 (24%) | ||
EGF_Lam | <1375..1403 | CDD:238012 | 13/36 (36%) | ||
Laminin_EGF | 1416..1462 | CDD:278482 | 25/45 (56%) | ||
Laminin_EGF | 1465..1520 | CDD:278482 | 22/56 (39%) | ||
EGF_Lam | 1523..>1560 | CDD:238012 | 19/38 (50%) | ||
Domain II and I | 1570..2140 | 138/629 (22%) | |||
Laminin_I | 1584..1848 | CDD:283627 | 60/292 (21%) | ||
SPEC | 1682..1881 | CDD:295325 | 44/217 (20%) | ||
Apolipoprotein | 1845..2059 | CDD:279749 | 55/226 (24%) | ||
Apolipoprotein | 2014..2152 | CDD:279749 | 35/164 (21%) | ||
Laminin_II | 2033..2168 | CDD:283628 | 35/161 (22%) | ||
Laminin_G_1 | 2170..2310 | CDD:278483 | 39/161 (24%) | ||
Laminin_G_1 | 2364..2503 | CDD:278483 | 32/143 (22%) | ||
LamG | 2524..2686 | CDD:238058 | 45/175 (26%) | ||
Laminin_G_1 | 2789..2917 | CDD:278483 | 33/149 (22%) | ||
LamG | 2937..3089 | CDD:238058 | 46/162 (28%) | ||
wb | NP_723870.1 | Laminin_N | 164..396 | CDD:278484 | 98/248 (40%) |
EGF_Lam | 401..450 | CDD:238012 | 20/53 (38%) | ||
TNFRSF | <407..507 | CDD:304602 | 43/120 (36%) | ||
EGF_Lam | 505..552 | CDD:238012 | 23/57 (40%) | ||
Laminin_EGF | 550..597 | CDD:278482 | 22/48 (46%) | ||
Laminin_B | 660..798 | CDD:278481 | 38/145 (26%) | ||
EGF_Lam | 851..900 | CDD:238012 | 20/48 (42%) | ||
Laminin_EGF | <943..971 | CDD:278482 | 15/27 (56%) | ||
VSP | 953..1414 | CDD:146106 | 153/468 (33%) | ||
Laminin_EGF | 974..1018 | CDD:278482 | 4/43 (9%) | ||
EGF_Lam | 1017..1065 | CDD:238012 | 8/47 (17%) | ||
Laminin_EGF | 1065..>1105 | CDD:278482 | 9/39 (23%) | ||
EGF_Lam | 1150..1197 | CDD:238012 | 23/46 (50%) | ||
Laminin_EGF | 1199..1247 | CDD:278482 | 19/47 (40%) | ||
EGF_Lam | 1247..1292 | CDD:238012 | 20/44 (45%) | ||
Laminin_EGF | 1294..1342 | CDD:278482 | 20/47 (43%) | ||
Laminin_EGF | 1340..1392 | CDD:278482 | 23/56 (41%) | ||
Laminin_B | 1486..1611 | CDD:278481 | 34/139 (24%) | ||
EGF_Lam | 1669..1716 | CDD:238012 | 26/47 (55%) | ||
Laminin_EGF | 1718..1767 | CDD:278482 | 21/53 (40%) | ||
EGF_Lam | 1772..1819 | CDD:238012 | 20/47 (43%) | ||
CrfC | <1933..2267 | CDD:223771 | 88/382 (23%) | ||
Laminin_II | 2277..2400 | CDD:283628 | 29/137 (21%) | ||
LamG | 2399..>2492 | CDD:304605 | 26/95 (27%) | ||
Laminin_G_2 | 2616..2755 | CDD:280389 | 32/140 (23%) | ||
Laminin_G_2 | 2804..2944 | CDD:280389 | 39/150 (26%) | ||
Laminin_G_2 | 3038..3169 | CDD:280389 | 33/146 (23%) | ||
LamG | 3192..3347 | CDD:238058 | 46/162 (28%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 74 | 1.000 | Domainoid score | I9127 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1063 | 1.000 | Inparanoid score | I254 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D128982at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004257 | |
OrthoInspector | 1 | 1.000 | - | - | otm43874 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100395 | |
Panther | 1 | 1.100 | - | - | O | PTHR10574 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X2997 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
12 | 11.830 |