Sequence 1: | NP_032507.2 | Gene: | Lama2 / 16773 | MGIID: | 99912 | Length: | 3118 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_476617.1 | Gene: | LanA / 38723 | FlyBaseID: | FBgn0002526 | Length: | 3712 | Species: | Drosophila melanogaster |
Alignment Length: | 4126 | Identity: | 965/4126 - (23%) |
---|---|---|---|
Similarity: | 1467/4126 - (35%) | Gaps: | 1479/4126 - (35%) |
- Green bases have known domain annotations that are detailed below.
Mouse 4 ATAGILLLLLLGTLEGSQTQRRQSQAHQQRGLFPAVLNLASNALITTNATCGE--KGPEMYCKLV 66
Mouse 67 ------EHVPGQPVRNPQCRICNQNSSNPYQRHPITNAIDGKNTWWQSPSIKNGVEYHYVTITLD 125
Mouse 126 LQQVFQIAYVIVKAANSPRPGNWILERSLD-DVEYKPWQYHAVTDTECLTLYNIYPRTGPPSY-- 187
Mouse 188 -AKDDEVICTSFYSKIHPLENGEIHISLINGRPSADD--PSPELLEFTSARYIRLRFQRIRTLNA 249
Mouse 250 DLMMFAHKDPREIDPIVTRRYYYSVKDISVGGMCICYGHARACPL-DPATNKS-----RCECEHN 308
Mouse 309 TCGESCDRCCPGFHQKPWRAGTFLTKSECEACNCHGKAEECYYDETVASRNLSLNIHGKYIGGGV 373
Mouse 374 CINCTHNTAGINCETCVDGFFRPKGVSPNYPRPCQPCHCD---PTGSLSEVCVKDEKYAQRGLKP 435
Mouse 436 GSCHCKTGFGGVNCDRCVRGYHGYPDCQPCNCSGLGSTNEDPCVG----PCSCKENVEGEDCSRC 496
Mouse 497 KSGFFNLQEDNQKGCEECFCSGVSNRCQSSYWTYGNIQDMRGWYLTDLSGRIRMAPQLDNPDSPQ 561
Mouse 562 QISISNSEARKSLLDGYYWSAPPPYLGNRLPAVGGQLSFTISYDLEEEEDDTEKILQLMIIFEGN 626
Mouse 627 DLRISTAYKEVYLEPSEEHIEEVSLKEEAFTIHGTNLPVTRKDFMIVLTNLERVLMQITYNLGMD 691
Mouse 692 AIFRLSSVNLESAVPYPTDRRIATDVEVCQCPPGYSGSSCETCWPRHRRVNGTIFGGICEPCQC- 755
Mouse 756 --FAHAEACDDITGECLNCKDHTGGPYCNECLPGFYGDPTRGSPEDCQPCACPLNIPS------- 811
Mouse 812 ------NNFSP-----------------TCHLDR--SLGLICDE-----CPIGYTGPRCERCAEG 846
Mouse 847 YFGQPSIPGGSCQP------------------CQCND---------------NLDYSIPGSCD-- 876
Mouse 877 ---------------SLSGSCLICKPGTTGRYCELCADGYFG-DAVNAKNCQPCRCNINGSFSEI 925
Mouse 926 CHTRTGQCECRPNVQG------------------------------------------------- 941
Mouse 942 ----------------------------------------------------------------- 941
Mouse 942 ----------------------------------------------------------------- 941
Mouse 942 ----------------------------------------------------------------- 941
Mouse 942 ----------------------------------------------------------------- 941
Mouse 942 ----------------------------------------------------------------- 941
Mouse 942 ----------------------------------------------------------------- 941
Mouse 942 -------------------RHC------------------------------------------- 944
Mouse 945 --------------------------------------DECKPETFGL--QLGRGCLPCNCNSFG 969
Mouse 970 SKSFDCEA-SGQCWCQPGVAGKKCDRCAHGYFNFQEGGCIACDCSHLGNNCDPKTGQCICPPNTT 1033
Mouse 1034 GEKCSECLPNTWGHSIVTGCKVCNCSTVGSLA---SQCNVNTGQCSCHPKFSGMKCSECSRGHWN 1095
Mouse 1096 YPLCTLCDCFLPGTDATTCDLETRKCSCSDQTGQCSCKVNVEGVHCDRCRPGKFGLDAKNPLGCS 1160
Mouse 1161 SCYCFGVTSQCSEAKGLIRTW---------VTLSD--EQTI------LPLVDEALQHTTTKGIAF 1208
Mouse 1209 QKPEIVAKMDEVRQELHLEPFYWKLPQQF--EGKKLMAYGGKLKYAIYFEARDETGFATYKPQVI 1271
Mouse 1272 IRGGTPTHARIITRHMAAPLIGQLTRHEIEMTEKEWKYYGDDPRISRTVTREDFLDILYDIHYIL 1336
Mouse 1337 IKATYGNVVRQSRISEISMEVAEPGHVLAGSPPAHLIERCDCPPGYSGLSCETCAPGFYRLRSEP 1401
Mouse 1402 GGRTPGPTLGTCVPCQCNGHSSQCDPETSVCQNCQHHTAGDFCERCALGYYG-IVRGLPNDCQPC 1465
Mouse 1466 ACPLISPSNNFSPSCVLEGLEDYRCTACPRGYEGQYCERCAPGYTGSPSSPGGSCQECEC----- 1525
Mouse 1526 ----------------------------------------------------------------- 1525
Mouse 1526 --------------DPYG---------------SLPVPCDRVTGLCTCRPGATGRKCDGC--EHW 1559
Mouse 1560 -HAREGAECVFC--------------------------GDECTG-----LLLGDLARLEQMTMN- 1591
Mouse 1592 --INLTGPLPAPYKILYGLEN---------TTQELKHLLSPQRAPERLIQLAEGNVNTLVMETNE 1645
Mouse 1646 LLTRATKVTADGEQTGQDAERTNSRAESLEEFIKGLVQDAEAINEKAVQLNETLGNQDKTAERN- 1709
Mouse 1710 ---------LEELQKEIDRMLK-----ELRSKDLQTQKEVAED------------------ELVA 1742
Mouse 1743 AEGLLKRVNKLFGEP-------RAQNEDMEKDLQQKLAEYKNKLDDAWDLLREATDKTRDANRLS 1800
Mouse 1801 AANQKNMTILETKKEAIEGSKRQIENTLKEGNDILDEANRLLGEINSVIDYVDDIKTKLP----- 1860
Mouse 1861 -----PMSEELSDKIDDLAQEIKDRRLAEKVFQAESHAAQLNDSSAVLDGILDEAKNISFNATAA 1920
Mouse 1921 FRAYSNIKDYIDEAEKVAREAKELAQGAT----------KLATSPQGLLKEDAKGSLQKSFRILN 1975
Mouse 1976 EAKKLANDVKGNHNDLNDLKTRLETADLRNSGLLGALNDTMDKLSAITNDTAAKLQAV------- 2033
Mouse 2034 -----KEKAREANDTAKAVLAQVKDLHQNLDGLKQNYNKLADSVAKTNAVVKD-PSKNKIIADAG 2092
Mouse 2093 TSVRNLEQEADRLIDKLKPIKELED-------NLKKNISEIKELINQARKQANSIKVSVSSGGDC 2150
Mouse 2151 VRTYR-PEIKK--GSYNNIVVHVKTAVADNLLFYLG-----SAKFIDFLAIEMRKGKVSFLWDVG 2207
Mouse 2208 SGVGRVEYPDLTIDDSYWYRIEASRTGRNGSISVRALDGPKASMVPSTYHSVSPPGY-----TIL 2267
Mouse 2268 DVDANAMLFVGGLTGKIKKADAVRVIT---FTGCMGETYFDNKPIGLWNFREKEGDCKGCTVSPQ 2329
Mouse 2330 VEDSEGTI---QFDGEGYA-------LVSRPIRWYPNISTVMFKFRT--FSSSALLMYLATRDLK 2382
Mouse 2383 DFMSVELSDGHV--KVSYDLGSGMTSVVSNQNHNDGKWKAFTLSRIQKQANISIVDIDSNQEENV 2445
Mouse 2446 ATSSSGNNFGLDLKADDKIYFGGLPTLRNLSMKARPEVNVKKYSGCLKDIEISRTPYNILSSPDY 2510
Mouse 2511 V---GVTKGCSLENVYTVSFP--KPGFVELAAVSIDVGTEINLSFSTRNESGIILLGSGGTLTPP 2570
Mouse 2571 RRKRRQTTQAYYAIFLNKGRLEVHLSSGTRTMRKIVIKPEPNLFHDGREHSVHVERTRGIFTVQI 2635
Mouse 2636 DE-DRRHMQNLTEEQP--IEVKKLFVGGAPPEFQP--SPLRNIPAFQGCVWNLVINSIPMDFAQP 2695
Mouse 2696 IAFKNADIGRC-------------TYQKPREDESEAVP---AEVIVQPQPVPTPAFPFPAP---- 2740
Mouse 2741 -----------------TMVHGPCVAESE----------------PALL---------------- 2756
Mouse 2757 ------TGSKQFGLSRNSHIAIAFDDTKVKNRLTIELEVRTEAESGLLFYMARINHADFATVQLR 2815
Mouse 2816 NGFPYFSYDLGSGDTSTMIPT--KINDGQWHKIKIVRVKQEGILYVD----DASSQTISPKKADI 2874
Mouse 2875 LDVVGILYVGGL------PINYTTRRIGPVTYSLDGCVRNLHMEQAPVDLDQPTSSFHVGTCFAN 2933
Mouse 2934 AESGTYFDG-TGFAKAVGGFKVGLDLLVEFEFRTTRPTGVLLGVSSQKMDGMGIEMIDEKLMFHV 2997
Mouse 2998 DNGAGRFTAIYDAGIPGH--MCNGQWHKVTAKKIKNRLELVVDGNQVDAQSPNSASTSADTNDPV 3060
Mouse 3061 FVGGFPGGLNQFGLTTNIRFRGCIRSLKLTK 3091 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lama2 | NP_032507.2 | Laminin_N | 45..281 | CDD:278484 | 102/249 (41%) |
EGF_Lam | 283..330 | CDD:238012 | 26/52 (50%) | ||
Laminin_EGF | 410..467 | CDD:278482 | 20/59 (34%) | ||
Laminin_EGF | 465..511 | CDD:278482 | 15/49 (31%) | ||
Laminin_B | 579..707 | CDD:278481 | 3/127 (2%) | ||
EGF_Lam | 752..801 | CDD:238012 | 19/51 (37%) | ||
EGF_Lam | 802..859 | CDD:238012 | 21/93 (23%) | ||
EGF_Lam | 860..912 | CDD:238012 | 23/102 (23%) | ||
EGF_Lam | 913..960 | CDD:238012 | 18/587 (3%) | ||
EGF_Lam | 963..1007 | CDD:214543 | 18/44 (41%) | ||
EGF_Lam | 1009..1054 | CDD:238012 | 20/44 (45%) | ||
Laminin_EGF | 1056..1104 | CDD:278482 | 19/50 (38%) | ||
Laminin_EGF | 1102..1159 | CDD:278482 | 21/56 (38%) | ||
LamB | 1225..1360 | CDD:214597 | 29/136 (21%) | ||
EGF_Lam | <1375..1403 | CDD:238012 | 19/27 (70%) | ||
Laminin_EGF | 1416..1462 | CDD:278482 | 26/46 (57%) | ||
Laminin_EGF | 1465..1520 | CDD:278482 | 25/54 (46%) | ||
EGF_Lam | 1523..>1560 | CDD:238012 | 22/138 (16%) | ||
Domain II and I | 1570..2140 | 140/692 (20%) | |||
Laminin_I | 1584..1848 | CDD:283627 | 66/315 (21%) | ||
SPEC | 1682..1881 | CDD:295325 | 55/248 (22%) | ||
Apolipoprotein | 1845..2059 | CDD:279749 | 52/245 (21%) | ||
Apolipoprotein | 2014..2152 | CDD:279749 | 33/157 (21%) | ||
Laminin_II | 2033..2168 | CDD:283628 | 31/157 (20%) | ||
Laminin_G_1 | 2170..2310 | CDD:278483 | 46/152 (30%) | ||
Laminin_G_1 | 2364..2503 | CDD:278483 | 36/142 (25%) | ||
LamG | 2524..2686 | CDD:238058 | 38/168 (23%) | ||
Laminin_G_1 | 2789..2917 | CDD:278483 | 37/139 (27%) | ||
LamG | 2937..3089 | CDD:238058 | 42/154 (27%) | ||
LanA | NP_476617.1 | LamNT | 18..271 | CDD:214532 | 108/265 (41%) |
EGF_Lam | 272..>314 | CDD:238012 | 20/44 (45%) | ||
EGF_Lam | 332..389 | CDD:238012 | 33/56 (59%) | ||
EGF_Lam | 402..443 | CDD:238012 | 17/53 (32%) | ||
EGF_Lam | 448..491 | CDD:238012 | 14/43 (33%) | ||
Laminin_EGF | 495..543 | CDD:278482 | 17/240 (7%) | ||
Laminin_EGF | 541..589 | CDD:278482 | 22/54 (41%) | ||
Laminin_EGF | 587..634 | CDD:278482 | 7/46 (15%) | ||
EGF_Lam | 631..673 | CDD:238012 | 12/41 (29%) | ||
Laminin_EGF | 677..729 | CDD:278482 | 7/51 (14%) | ||
Laminin_EGF | 732..782 | CDD:278482 | 16/50 (32%) | ||
EGF_Lam | 785..828 | CDD:238012 | 11/42 (26%) | ||
CBM6-CBM35-CBM36_like | 831..966 | CDD:271143 | 0/134 (0%) | ||
Laminin_EGF | 1375..1423 | CDD:278482 | 20/49 (41%) | ||
EGF_Lam | 1420..1457 | CDD:238012 | 17/37 (46%) | ||
Laminin_EGF | 1466..1516 | CDD:278482 | 19/50 (38%) | ||
Laminin_EGF | 1514..1562 | CDD:278482 | 21/56 (38%) | ||
LamB | 1632..1760 | CDD:214597 | 30/139 (22%) | ||
Laminin_EGF | <1775..1801 | CDD:278482 | 19/32 (59%) | ||
EGF_Lam | 1808..1851 | CDD:238012 | 25/42 (60%) | ||
EGF_Lam | 1859..1907 | CDD:214543 | 22/47 (47%) | ||
EGF_Lam | 1916..1968 | CDD:238012 | 3/51 (6%) | ||
EGF_Lam | 1969..2015 | CDD:238012 | 3/45 (7%) | ||
EGF_Lam | 2016..>2054 | CDD:238012 | 14/37 (38%) | ||
EGF_Lam | 2063..>2097 | CDD:238012 | 4/33 (12%) | ||
Laminin_I | 2129..2385 | CDD:283627 | 63/293 (22%) | ||
Tar | 2278..2662 | CDD:223910 | 91/432 (21%) | ||
Laminin_II | 2566..2700 | CDD:283628 | 30/136 (22%) | ||
LamG | 2674..2843 | CDD:238058 | 51/176 (29%) | ||
LamG | 2878..3029 | CDD:238058 | 44/172 (26%) | ||
LamG | 3078..3205 | CDD:214598 | 32/147 (22%) | ||
LamG | 3349..3512 | CDD:238058 | 45/165 (27%) | ||
LamG | 3535..3689 | CDD:238058 | 42/155 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 88 | 1.000 | Domainoid score | I7905 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2298 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.840 |