Sequence 1: | NP_032506.2 | Gene: | Lama1 / 16772 | MGIID: | 99892 | Length: | 3083 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_723870.1 | Gene: | wb / 43946 | FlyBaseID: | FBgn0261563 | Length: | 3375 | Species: | Drosophila melanogaster |
Alignment Length: | 3488 | Identity: | 1002/3488 - (28%) |
---|---|---|---|
Similarity: | 1555/3488 - (44%) | Gaps: | 659/3488 - (18%) |
- Green bases have known domain annotations that are detailed below.
Mouse 3 GSGTGAALLVLLASVLWVTVRSQQRGLFPAILNLATNAHISANATCGEKGPEMFCKLVEHVPGRP 67
Mouse 68 VRHAQCRVCDGNSTNPRERHPISHAIDG----------TNNWWQSPSIQNGREYHWVTVTLDLRQ 122
Mouse 123 VFQVAYIIIKAANAPRPGNWILERSVDGVKFKPWQYYAVSDTECLTRYKITPRRGPPTYRADNEV 187
Mouse 188 ICTSYYSKLVPLEHGEIHTSLINGRPSADDPSPQLLEFTSARYIRLRLQRIR-TLNADLMTLSHR 251
Mouse 252 DLRDLD-----PIVTRRYYYSIKDISVGGMCICYGHASSCPWDEEAKQLQCQCEHNTCGESCDRC 311
Mouse 312 CPGYHQQPWRPGTISSGNECEECNCHNKAKDCYYDSSVAKERRSLNTAGQYSGGGVCVNCSQNTT 376
Mouse 377 GINCETCIDQYYRPHKVSPYDDHPCRPCNCDPVGSLSSVCIKDDRHADLANGKWPGQCPCRKGYA 441
Mouse 442 GDKCDRCQFGYRGFPNCIPCDCRTVGSL-NEDPCIEPCLCKKNVEGKNCDRCKPGFYNLKERNPE 505
Mouse 506 GCSECFCFGVSGVCDSLTWSISQVTNMSGWLVTDLMSTNKIRSQQDVLGGHRQISINNTAVMQRL 570
Mouse 571 TSTYYWAAPEAYLGNKLTAFGGFLKYTVSYDIPVETVDSDLMSHADIIIKG-NGLTIS---TRAE 631
Mouse 632 GLSLQPYEEYFNVVRL------VPENFRDFDTR-----------REIDRDQLMTVLANVTHLLIR 679
Mouse 680 ANYN------SAKMALYRLDSVSLDIASPNAIDLAVAADVEHCECPQGYTGTSCEACLPGYYRV- 737
Mouse 738 -----DGILFGGICQPCECHGHASECDIH-GICSVCTHNTTGDHCEQCLPGFYGTPSRGTPGDCQ 796
Mouse 797 PCACPLSIDSNNFSPTC--------------HLTDGEEVVCDQCAPGYSGSWCERCADGYYGNPT 847
Mouse 848 VPGGTCVPCNCSGNVDPLEAGHCDSVTGECLKCLWNTDGAHCERCADGFYGDAVTAKNCRACDCH 912
Mouse 913 ENGSLSGICHLETGLCDCKPHVTGQQCD------------------------------------- 940
Mouse 941 -----------QCLSGYYGL-----------------------------------DTGLGCVPCN 959
Mouse 960 CSVEGSVSDNCTEE--------------------------------------------------G 974
Mouse 975 QCHCGPGVSGKQCDRCSHGFYAFQDGGCTPCDCAHTQNN-CDPASGECLCPPHTQGLKCEECEEA 1038
Mouse 1039 YWGLDPEQGCQACNCSAVGSTSAQCDVLSGHCPCKKGFGGQSCHQCSLGYRSFPDCVPCGCDLRG 1103
Mouse 1104 TLPDTCDLEQGLCSCSEDGGTCSCKENAVGPQCSKCQAGTFALRGDNPQGCSPCFCFGLSQLCSE 1168
Mouse 1169 LE---GYVRTLIT--LASDQPLLHVVSQSNLKGTI----EGVHFQPPDTLLDAEAVRQH------ 1218
Mouse 1219 ---------IYAE---PFYWRLPKQFQGDQLLAYGGKLQYSVAFYSTLGTGTSN--YEPQVLIKG 1269
Mouse 1270 GRARKH------VIYMDAPAPENGVRQDYEVRMKEEFWKYFNSVSEKHVTHSDFMSVLSNIDYIL 1328
Mouse 1329 IKASYGQGLQQSRIANISMEVG---RKAVELPAEGEAALLLELCVCPPGTAGHSCQDCAPGYYRE 1390
Mouse 1391 K---LPESGGRGPRPLLAPCVPCNCNNHSDVCDPETGKCLSCRDHTSGDHCELCASGYYGKVTGL 1452
Mouse 1453 PGDCTPCTCPHHPPFSFSPTCVVEGDSDFRCNACLPGYEGQYCERCSAGYHGNP-RAAGGSCQTC 1516
Mouse 1517 DCNPQGSVHSDCDRASGQCVCKPGATGLHCEKC-LPRHILMESDCVSCDDDCVGPLLNDLDSVGD 1580
Mouse 1581 ----AVLSLNLTGVSPAPYGILENLEN--------------TTKYFQRYLIKENAKKIRAEIQLE 1627
Mouse 1628 GIAEQTENLQKELTRVLARHQKVNAEMERTSNGTQALATFIEQLHANIKEITEKVATLNQTARKD 1692
Mouse 1693 FQPPVSALQS-MHQNISSLLGLIKERNFTEMQQNATLELKAAKDLLSRIQKRFQKPQEKLKALKE 1756
Mouse 1757 ANSLLSNHSEKLQAAEELLKEAGSKTQESNLLLLLVKANLKEFQEKKL-------RVQEEQNVTS 1814
Mouse 1815 ELIAKGREWVDAAGTHTAAAQDTLTQLEHHRDE---------LLLWARK---IRSHVDDL----- 1862
Mouse 1863 -------VMQMSKRRAR-DLVHRAEQHASELQSRAGALDRDLENVRNVSLNATSAAHVHSNIQTL 1919
Mouse 1920 TEEAEMLAA-------DAHKTANKTDLISESLASRGKAVLQRSSRFLKESVSTRRKQQGITMKLD 1977
Mouse 1978 ------------------ELKNLTSQFQESMD-NIMKQANDSLAMLRESPGGMREKGRKARELAA 2023
Mouse 2024 AAN--ESAVKTLEDVLALSLRVFNTSEDLSRVNATVQETNDLLHNSTMTTLLAGRKMKDMEMQAN 2086
Mouse 2087 LLLDRLKPLKTLEENLSRNLSEIKLLISRARKQVASIKVAV-SADRDCIRAYQPQT---SSTNYN 2147
Mouse 2148 TLILNVKTQEPDNLLFYLGSSSSSDFLAVEMRRGKVAFLWDLGSGSTRLEFPEVSIN-----NNR 2207
Mouse 2208 WHSIYITRFGNMGSLSVKEAS-----AAENPPVRTSKSPGPSKVLDINNSTLMFVGGLGGQ-IKK 2266
Mouse 2267 SPAVKVTHFKGCMGEAFLNGKSIGLWNYIEREGKCNGCF-GSSQNEDSSF--HFDGSGYAMVEKT 2328
Mouse 2329 L-RPT---VTQIVILFSTFSPNGLLFYLASNGTKDFLSIELVRGRVKVMVDLG-SGPLTLMTDRR 2388
Mouse 2389 YNNGTWYKI------AFQRNRKQGLLAVFDAYDTSDKETKQGET-PGAASDLNRLEKDLIYVGGL 2446
Mouse 2447 P------HSKAVRKGVSSRSYVGCIKNLEISRSTFDLLRNS--YGVRKGCALEPIQSVSFLRGGY 2503
Mouse 2504 VEMPPKSLSPESSLLATFATKNSSGILLVA------LGK-DAEEAGGAQAHVPFFSIMLLEGRIE 2561
Mouse 2562 VHVNSGDGTSLRKALLHAPTGSYSDGQEHSISLVRNRRVITIQVDENSPVEMKLGPLTEGKTI-- 2624
Mouse 2625 ---DISNLYIGGL-PEDKATPMLKMRTSFHGCIKNVVLDAQLLDFTHA--------------TGS 2671
Mouse 2672 EQVELDTCLLAEEPM--QSLHREHGELPPEPPTLPQPELCAVDTAPGYVAGAHQFG--LSQNSHL 2732
Mouse 2733 VLPLNQSDVRKRLQVQLSIRTFASSGLIYYV--AHQNQMDYATLQLQEGRLHFMFDLGKGRTKVS 2795
Mouse 2796 HPALLSDGKWHTVKTEYIKRKAFMTVDGQESPSVTVVGNATTLDVERK------LYLGGLPSH-- 2852
Mouse 2853 YRARNIGTITHSIPACIGEIMVNGQQLDKDRPLSASAVDRCYVVAQEGTFFEGSGYAALVKEGYK 2917
Mouse 2918 VRLDLNITLEFRTTSKNGVLLGISSAK-VDAIGLEIVDGKVLFHVNNGAG---RITATYQPRAAR 2978
Mouse 2979 ALCDGKWHTLQAHKSKHRIVLTVD--------GNSVRAESPHTHSTSADTNDPIYVGGYPAHIKQ 3035
Mouse 3036 NCLSSRASFRGCVRNLRLSRGSQVQSLDLSRAFDLQGVFPHSC 3078 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lama1 | NP_032506.2 | LamNT | 25..275 | CDD:214532 | 99/265 (37%) |
EGF_Lam | 277..324 | CDD:238012 | 17/46 (37%) | ||
Laminin_EGF | 404..463 | CDD:278482 | 18/58 (31%) | ||
Laminin_EGF | 461..507 | CDD:278482 | 20/46 (43%) | ||
Laminin_B | 575..714 | CDD:306547 | 41/165 (25%) | ||
EGF_Lam | 748..796 | CDD:238012 | 26/48 (54%) | ||
Laminin_EGF | 798..853 | CDD:278482 | 32/68 (47%) | ||
EGF_Lam | 855..907 | CDD:238012 | 22/51 (43%) | ||
Laminin_EGF | 909..955 | CDD:278482 | 21/128 (16%) | ||
EGF_Lam | 958..1002 | CDD:214543 | 19/93 (20%) | ||
EGF_Lam | 1004..1049 | CDD:238012 | 16/45 (36%) | ||
Laminin_EGF | 1051..1099 | CDD:278482 | 18/47 (38%) | ||
Laminin_EGF | 1097..1154 | CDD:278482 | 20/56 (36%) | ||
Cell attachment site | 1147..1149 | 0/1 (0%) | |||
Laminin_B | 1225..1367 | CDD:306547 | 39/152 (26%) | ||
Laminin_EGF | 1410..1456 | CDD:278482 | 23/45 (51%) | ||
Laminin_EGF | 1459..1513 | CDD:278482 | 23/54 (43%) | ||
EGF_Lam | 1516..>1553 | CDD:238012 | 16/37 (43%) | ||
Domain II and I | 1564..2123 | 129/637 (20%) | |||
Laminin_I | 1582..1837 | CDD:310534 | 55/276 (20%) | ||
DUF390 | <1827..>2064 | CDD:330463 | 60/289 (21%) | ||
Laminin_II | 2018..2152 | CDD:283628 | 26/139 (19%) | ||
LamG | 2136..2285 | CDD:238058 | 30/162 (19%) | ||
LamG | 2314..2470 | CDD:238058 | 53/175 (30%) | ||
LamG | 2495..2659 | CDD:238058 | 52/176 (30%) | ||
Laminin_G_1 | 2751..2880 | CDD:278483 | 31/138 (22%) | ||
LamG | 2900..3053 | CDD:238058 | 53/164 (32%) | ||
wb | NP_723870.1 | Laminin_N | 164..396 | CDD:278484 | 94/248 (38%) |
EGF_Lam | 401..450 | CDD:238012 | 19/53 (36%) | ||
TNFRSF | <407..507 | CDD:304602 | 42/120 (35%) | ||
EGF_Lam | 505..552 | CDD:238012 | 19/59 (32%) | ||
Laminin_EGF | 550..597 | CDD:278482 | 20/46 (43%) | ||
Laminin_B | 660..798 | CDD:278481 | 38/142 (27%) | ||
EGF_Lam | 851..900 | CDD:238012 | 26/48 (54%) | ||
Laminin_EGF | <943..971 | CDD:278482 | 15/27 (56%) | ||
VSP | 953..1414 | CDD:146106 | 141/474 (30%) | ||
Laminin_EGF | 974..1018 | CDD:278482 | 23/52 (44%) | ||
EGF_Lam | 1017..1065 | CDD:238012 | 17/47 (36%) | ||
Laminin_EGF | 1065..>1105 | CDD:278482 | 3/39 (8%) | ||
EGF_Lam | 1150..1197 | CDD:238012 | 7/46 (15%) | ||
Laminin_EGF | 1199..1247 | CDD:278482 | 14/47 (30%) | ||
EGF_Lam | 1247..1292 | CDD:238012 | 16/44 (36%) | ||
Laminin_EGF | 1294..1342 | CDD:278482 | 18/47 (38%) | ||
Laminin_EGF | 1340..1392 | CDD:278482 | 20/56 (36%) | ||
Laminin_B | 1486..1611 | CDD:278481 | 36/132 (27%) | ||
EGF_Lam | 1669..1716 | CDD:238012 | 24/47 (51%) | ||
Laminin_EGF | 1718..1767 | CDD:278482 | 23/51 (45%) | ||
EGF_Lam | 1772..1819 | CDD:238012 | 19/46 (41%) | ||
CrfC | <1933..2267 | CDD:223771 | 71/350 (20%) | ||
Laminin_II | 2277..2400 | CDD:283628 | 29/141 (21%) | ||
LamG | 2399..>2492 | CDD:304605 | 20/93 (22%) | ||
Laminin_G_2 | 2616..2755 | CDD:280389 | 41/146 (28%) | ||
Laminin_G_2 | 2804..2944 | CDD:280389 | 44/152 (29%) | ||
Laminin_G_2 | 3038..3169 | CDD:280389 | 31/135 (23%) | ||
LamG | 3192..3347 | CDD:238058 | 53/164 (32%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 74 | 1.000 | Domainoid score | I9127 |
eggNOG | 1 | 0.900 | - | - | E1_KOG1836 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1063 | 1.000 | Inparanoid score | I254 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D128982at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0004257 | |
OrthoInspector | 1 | 1.000 | - | - | otm43874 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_100395 | |
Panther | 1 | 1.100 | - | - | O | PTHR10574 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2160 |
SonicParanoid | 1 | 1.000 | - | - | X2997 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.860 |