| Sequence 1: | NP_032506.2 | Gene: | Lama1 / 16772 | MGIID: | 99892 | Length: | 3083 | Species: | Mus musculus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001285243.1 | Gene: | NetA / 32398 | FlyBaseID: | FBgn0015773 | Length: | 726 | Species: | Drosophila melanogaster |
| Alignment Length: | 554 | Identity: | 158/554 - (28%) |
|---|---|---|---|
| Similarity: | 234/554 - (42%) | Gaps: | 122/554 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Mouse 25 QQRGLFPAILNLATNAHISANATCGEKGPEMFCKLVEHVPGRPVRHAQCRVCDGNSTNPRERHPI 89
Mouse 90 SHAID--GTNN---WWQSPSIQNGREYHWVTVTLDLRQVFQVAYIIIK-AANAPRPGNWILERSV 148
Mouse 149 D-GVKFKPWQYYAVSDTECLTRYKITPRRGPPTYRADNEVICTSYYSKLVPLEHGEIHTSLINGR 212
Mouse 213 PSAD--DPSPQLLEFTSARYIRL---RLQRIRTLNADLMTLSHRDLRDLDPIVTRRY-------- 264
Mouse 265 --------------------YYSIKDISVGGMCICYGHASSCPWDEEAKQLQCQCEHNTCGESCD 309
Mouse 310 RCCPGYHQQPWRPGTISSGNECEECNCHNKAKDCYYDSSVAKERRSLNTAGQYSGGGVCVNCSQN 374
Mouse 375 TTGINCETCIDQYYRPHKVSPYDDHPCRPCNCDPVGSLSSVCIKDDRHADLANGKWPGQCPCRKG 439
Mouse 440 YAGDKCDRCQFGYRGFPNCI-PC-----------DCRTVGSLNEDPCIEPCLCKKNVEGKNCDR- 491
Mouse 492 ------CKPGFYNLKERNPEGCSECFCFGVSGVC 519 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Lama1 | NP_032506.2 | LamNT | 25..275 | CDD:214532 | 74/289 (26%) |
| EGF_Lam | 277..324 | CDD:238012 | 22/46 (48%) | ||
| Laminin_EGF | 404..463 | CDD:278482 | 21/70 (30%) | ||
| Laminin_EGF | 461..507 | CDD:278482 | 9/63 (14%) | ||
| Laminin_B | 575..714 | CDD:306547 | |||
| EGF_Lam | 748..796 | CDD:238012 | |||
| Laminin_EGF | 798..853 | CDD:278482 | |||
| EGF_Lam | 855..907 | CDD:238012 | |||
| Laminin_EGF | 909..955 | CDD:278482 | |||
| EGF_Lam | 958..1002 | CDD:214543 | |||
| EGF_Lam | 1004..1049 | CDD:238012 | |||
| Laminin_EGF | 1051..1099 | CDD:278482 | |||
| Laminin_EGF | 1097..1154 | CDD:278482 | |||
| Cell attachment site | 1147..1149 | ||||
| Laminin_B | 1225..1367 | CDD:306547 | |||
| Laminin_EGF | 1410..1456 | CDD:278482 | |||
| Laminin_EGF | 1459..1513 | CDD:278482 | |||
| EGF_Lam | 1516..>1553 | CDD:238012 | |||
| Domain II and I | 1564..2123 | ||||
| Laminin_I | 1582..1837 | CDD:310534 | |||
| DUF390 | <1827..>2064 | CDD:330463 | |||
| Laminin_II | 2018..2152 | CDD:283628 | |||
| LamG | 2136..2285 | CDD:238058 | |||
| LamG | 2314..2470 | CDD:238058 | |||
| LamG | 2495..2659 | CDD:238058 | |||
| Laminin_G_1 | 2751..2880 | CDD:278483 | |||
| LamG | 2900..3053 | CDD:238058 | |||
| NetA | NP_001285243.1 | LamNT | 44..280 | CDD:214532 | 69/258 (27%) |
| EGF_Lam | 312..357 | CDD:238012 | 22/45 (49%) | ||
| EGF_Lam | 369..426 | CDD:238012 | 20/63 (32%) | ||
| EGF_Lam | 431..479 | CDD:238012 | 19/58 (33%) | ||
| NTR_netrin-1_like | 545..723 | CDD:239634 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.910 | |||||