DRSC/TRiP Functional Genomics Resources

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Protein Alignment DES and Lam

DIOPT Version :10

Sequence 1:NP_001918.3 Gene:DES / 1674 HGNCID:2770 Length:470 Species:Homo sapiens
Sequence 2:NP_476616.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster


Alignment Length:156 Identity:39/156 - (25%)
Similarity:53/156 - (33%) Gaps:47/156 - (30%)


- Green bases have known domain annotations that are detailed below.


Human  2589 GNIPTTHPLMVRHADHSSLTLGSGSSTTRLTQGIGRSQRTL-RQLTANTGHTIHVHYPGNRQPNP 2652
            |...|.|||           .|:|.....|..|...||:|: |:|..:         |......|
  Fly     9 GRFFTKHPL-----------AGNGLVYGTLYVGAEFSQQTITRKLLTD---------PPQDIDRP 53

Human  2653 PLILQRLLGPSAAADILQ-----LSSSLPLQSRGRARLLVGND---DVHIIARSDDELLDDFFHD 2709
            .|....::|....:.||.     |..:.|    |.|:.::...   |..|:.   ..||..||..
  Fly    54 TLARYAVMGTFIYSPILYNWYKWLDKTFP----GTAKRIIVKKLLLDQFILT---PPLLVIFFTG 111

Human  2710 QSTATSQAGTLSSIPTALTRWTEECK 2735
            .|....|    |||       ||||:
  Fly   112 MSLMERQ----SSI-------TEECR 126

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DESNP_001918.3 head 1..107
Head 2..108
Filament_head 9..106 CDD:461414
Filament 107..415 CDD:459643
rod 108..411
Coil 1A 109..141
Linker 1 142..151
Coil 1B 152..252
Linker 12 253..268
Interaction with NEB. /evidence=ECO:0000269|PubMed:23615443 268..415
Coil 2A 269..287
Linker 2 288..295
Coil 2B 296..412
tail 412..469
Tail 413..470
Interaction with CRYAB. /evidence=ECO:0000269|PubMed:28470624 438..453
LamNP_476616.1 Filament 54..409 CDD:459643 23/91 (25%)
LTD 467..572 CDD:460003
Blue background indicates that the domain is not in the aligned region.

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