| Sequence 1: | NP_032504.3 | Gene: | L1cam / 16728 | MGIID: | 96721 | Length: | 1259 | Species: | Mus musculus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_649461.2 | Gene: | Cont / 40553 | FlyBaseID: | FBgn0037240 | Length: | 1390 | Species: | Drosophila melanogaster |
| Alignment Length: | 1106 | Identity: | 269/1106 - (24%) |
|---|---|---|---|
| Similarity: | 474/1106 - (42%) | Gaps: | 199/1106 - (17%) |
- Green bases have known domain annotations that are detailed below.
|
Mouse 11 LLLCSPCLL-------IQIPDEYKGHHVLE---------PPVITEQ--------SPRRLVVFPTD 51
Mouse 52 DISLKCEARGRPQVEFRWTK-----DGIHFKPKEELGVVVHEAPYSGSFTIEGNNSFAQR----- 106
Mouse 107 FQGIYRCYASNKLGTAMSHEIQL----VAEGAPKWPKETVKPVEVEEGESVVLPCNPPPSAAPLR 167
Mouse 168 IYWMNSKILH-IKQDERVSMGQNGDLYFANVLTSDNHSDYICNAHFPGTRTII----QKEP-IDL 226
Mouse 227 RVKPTNSMIDRKPRLLFPTNSSSRL---VALQGQSLILECIAEGFPTPTIKWLHPSDPMPTDRVI 288
Mouse 289 YQ-NHNKTLQLLNVGEEDDGEYTCLAENSLGSARHAYYVTVEAAPYWLQKPQSHLYGPGETARLD 352
Mouse 353 CQVQGRPQPEITWRINGMSME--TVNKDQKYRIEQGSLILSNVQ-PSDTMVTQCEARNQHGLLLA 414
Mouse 415 NAYIYVVQLPARILTK--DNQTYMAVEGSTAYLLCKAFGAPVPSVQWLDEEGTTVLQ--DERFFP 475
Mouse 476 YANGTLSIRDLQANDTGRYFC----QAANDQNNVTILANLQVKEATQITQGPRSAIEKKGARVTF 536
Mouse 537 TCQASFDPSLQASITWRGDGRDLQERGDSDKYFIED-GKLVIQSLDYSDQGNYSCVASTELDEVE 600
Mouse 601 SRAQLLVVGSPGPVPHLELSDRHLLKQSQVHLSWSPAEDHNSPIEKYDIEFEDKEMAPEKWFSLG 665
Mouse 666 KVPGNQT---------------------STTLKLSPYVHYTFRVTAINKYGPGEPSPVSETVVTP 709
Mouse 710 EAAPEKNPVDVRGEGNETNNMVITWKPLRWMDWNAPQIQYRVQWRPQG----------KQETWRE 764
Mouse 765 QTVSDPFLVVSNTSTFVPYEIKVQAVNNQGKGPEPQVTIGYSGEDYPQVSPELEDITIFNSSTVL 829
Mouse 830 VRWRPVDLAQ--VKGHLKGYNVTYWWKGSQRKHSKRHIHKSHIVVPANTTS--AILSGLRPYSSY 890
Mouse 891 HVEVQAFNGRGLGPAS----EWTFSTPEGVPGHPEALHLECQSDTSLLLHWQPPLSHNGVLTGYL 951
Mouse 952 ---LSYHPVEGESKEQLFFNLSDPELRTHN-------------LTNLNPDLQYRFQLQATTQQGP 1000
Mouse 1001 G 1001 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| L1cam | NP_032504.3 | Ig_L1-CAM_like | 53..130 | CDD:319299 | 22/90 (24%) |
| Ig | 133..227 | CDD:386229 | 25/99 (25%) | ||
| Ig3_L1-CAM | 259..329 | CDD:143284 | 21/70 (30%) | ||
| Ig | 346..421 | CDD:386229 | 17/77 (22%) | ||
| IG_like | 433..513 | CDD:214653 | 23/85 (27%) | ||
| Ig | 518..607 | CDD:386229 | 22/89 (25%) | ||
| Cell attachment site. /evidence=ECO:0000255 | 553..555 | 0/1 (0%) | |||
| Cell attachment site. /evidence=ECO:0000255 | 562..564 | 0/1 (0%) | |||
| FN3 | 611..708 | CDD:238020 | 23/117 (20%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 697..724 | 10/26 (38%) | |||
| fn3 | 717..798 | CDD:365830 | 28/90 (31%) | ||
| fn3 | 824..904 | CDD:365830 | 25/83 (30%) | ||
| fn3 | 920..1002 | CDD:365830 | 20/98 (20%) | ||
| Bravo_FIGEY | 1146..1231 | CDD:372781 | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1182..1209 | ||||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1228..1259 | ||||
| Cont | NP_649461.2 | CLECT | 139..>223 | CDD:214480 | |
| Ig | 361..460 | CDD:299845 | 26/110 (24%) | ||
| I-set | 362..462 | CDD:254352 | 26/111 (23%) | ||
| Ig | 466..559 | CDD:299845 | 26/103 (25%) | ||
| IG_like | 584..657 | CDD:214653 | 22/74 (30%) | ||
| IGc2 | 586..645 | CDD:197706 | 20/60 (33%) | ||
| Ig | 667..751 | CDD:299845 | 17/84 (20%) | ||
| IG_like | 676..751 | CDD:214653 | 17/75 (23%) | ||
| IG_like | 765..844 | CDD:214653 | 23/82 (28%) | ||
| Ig | 773..844 | CDD:299845 | 22/74 (30%) | ||
| I-set | 851..940 | CDD:254352 | 22/88 (25%) | ||
| Ig | 866..944 | CDD:299845 | 20/77 (26%) | ||
| FN3 | 944..1043 | CDD:238020 | 23/115 (20%) | ||
| FN3 | 1053..1146 | CDD:238020 | 30/97 (31%) | ||
| fn3 | 1156..1244 | CDD:278470 | 28/95 (29%) | ||
| fn3 | 1259..1346 | CDD:278470 | 21/101 (21%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_KOG3513 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||