DRSC/TRiP Functional Genomics Resources

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Protein Alignment PRICKLE2 and prickle2b

DIOPT Version :10

Sequence 1:NP_942559.1 Gene:PRICKLE2 / 166336 HGNCID:20340 Length:844 Species:Homo sapiens
Sequence 2:XP_068080220.1 Gene:prickle2b / 368250 ZFINID:ZDB-GENE-030724-6 Length:900 Species:Danio rerio


Alignment Length:868 Identity:578/868 - (66%)
Similarity:671/868 - (77%) Gaps:48/868 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     1 MVTVMPLEMEKTISKLMFDFQRNSTSDDDSGCALEEYAWVPPGLKPEQVHQYYSCLPEEKVPYVN 65
            :||.||||||||::|||:||||||||||||||||||||||||||||||||||||.|||:||||||
Zfish    57 VVTAMPLEMEKTVTKLMYDFQRNSTSDDDSGCALEEYAWVPPGLKPEQVHQYYSSLPEDKVPYVN 121

Human    66 SPGEKLRIKQLLHQLPPHDNEVRYCNSLDEEEKRELKLFSSQRKRENLGRGNVRPFPVTMTGAIC 130
            |||||.|||||||||||||||||||||||:||||||||||:||||||||||||||||||||||||
Zfish   122 SPGEKYRIKQLLHQLPPHDNEVRYCNSLDDEEKRELKLFSNQRKRENLGRGNVRPFPVTMTGAIC 186

Human   131 EQCGGQINGGDIAVFASRAGHGVCWHPPCFVCTVCNELLVDLIYFYQDGKIYCGRHHAECLKPRC 195
            |||||||||||||||||||||||||||.||||::|:|||||||||||||||:|||||||.|||||
Zfish   187 EQCGGQINGGDIAVFASRAGHGVCWHPQCFVCSMCDELLVDLIYFYQDGKIFCGRHHAERLKPRC 251

Human   196 AACDEIIFADECTEAEGRHWHMKHFCCFECETVLGGQRYIMKEGRPYCCHCFESLYAEYCDTCAQ 260
            :||||||.|||||||||||||||||||||||||||||||||||||||||.|||||||||||:|.:
Zfish   252 SACDEIILADECTEAEGRHWHMKHFCCFECETVLGGQRYIMKEGRPYCCTCFESLYAEYCDSCGE 316

Human   261 HIGIDQGQMTYDGQHWHATETCFCCAHCKKSLLGRPFLPKQGQIFCSRACSAGEDPNGSDSSDSA 325
            ||||||||||||||||||||.||.||.||||||||||||||||||||||||.|:|.|||||||||
Zfish   317 HIGIDQGQMTYDGQHWHATEACFSCARCKKSLLGRPFLPKQGQIFCSRACSVGDDQNGSDSSDSA 381

Human   326 FQNARAKESRRSAKIGKNKGKTEEPMLNQHSQLQVSSNRLSADVDPLSLQMDMLSLSSQTPSLNR 390
            ||:||::|:|||:. ..||..|.....:.|...:.|:.|.||||||||||||:||||||||||||
Zfish   382 FQSARSREARRSSS-KSNKSSTGGSGGDGHQSGKASAMRFSADVDPLSLQMDLLSLSSQTPSLNR 445

Human   391 D-PIWRSREEPYHYGNKMEQNQTQSPLQLLSQCNIRTSY----SPGGQGAGAQPEMWGKHFSNP- 449
            : |.|:::.|.:.|..:.|  .:.:||.|||||||||||    |||             |.|:| 
Zfish   446 ESPSWKTQAEMFGYEGRNE--LSTNPLHLLSQCNIRTSYSSNLSPG-------------HLSDPR 495

Human   450 -------KRSSSLAMTGHA--GSFIKECREDYYPGRLRSQESYSDMSSQSFSETRGSIQVPKYEE 505
                   ||....|:.|.:  .::.::..|||||..||:|.|::::...||.:.| |:.:..::.
Zfish   496 PKEPASSKRPPVSALKGKSLNENWFQQGPEDYYPPALRTQASFNEVPHNSFMDKR-SVSLHVFQR 559

Human   506 EEEEEGGLSTQQCRTRHPISSLKYTEDMTPTEQTPRGSMESLALSNATGLSADGGAKRQEHLSRF 570
            |:|::.|  .|..|:|:|||:|.::|.:||.||||||||||||||||||.|||||:|||||||||
Zfish   560 EKEKDVG--PQMSRSRNPISALGFSEQLTPLEQTPRGSMESLALSNATGTSADGGSKRQEHLSRF 622

Human   571 SMPDLSKDSGMNVSEKLSNMGTLNSSMQFRSAESVRSLLSAQQYQEMEGNLHQLSNPIGY-RDLQ 634
            |||||||||||||||| |||||||||:||.|:||:|||.|||.|.|:|..: |:..|:.| |:..
Zfish   623 SMPDLSKDSGMNVSEK-SNMGTLNSSVQFHSSESLRSLNSAQPYLELEAPV-QVRFPVQYPREPS 685

Human   635 SHGRMHQSFDFDGGMAGSKLPGQEGVRIQPMSERTRRRATSRDD-NRRFRPHRSRRSRRSRSDNA 698
            ....:...|.:......|.:......|:.|||||||||:...:: .||...||||||||||||||
Zfish   686 GINALPPGFAYQEEDRVSLVSNANNARLPPMSERTRRRSIDHEEPRRRHHHHRSRRSRRSRSDNA 750

Human   699 LHLASEREAISRLKDRPPLRAREDYDQFMRQRSFQESMGHGS-RRDLYGQCPRTVSDLALQN-AF 761
            |:|.:||....:   |..|.||||||||...|..:::.|.|. |:..:..||||.|||.||| |.
Zfish   751 LNLVAERRPAPK---RSQLHAREDYDQFPLPRGSRDTYGSGRLRQQPFRPCPRTTSDLTLQNPAL 812

Human   762 GDRWGPY-FAEY----DWCSTCSSSSESDNEGYFLGEPIPQPARLRYVTSDELLHKYSSYGLPKS 821
            ....||| :.:|    ||||||||||||::||||||||||:|.:||::||:|||.||:|.||..|
Zfish   813 HRHQGPYSWDQYDYNDDWCSTCSSSSESEDEGYFLGEPIPRPIQLRHMTSEELLRKYNSSGLGAS 877

Human   822 STLGGRGQLHSRKRQKSKNCIIS 844
            ...|.|||||.|||:||||||||
Zfish   878 GQFGSRGQLHMRKRRKSKNCIIS 900

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRICKLE2NP_942559.1 PET_Prickle 26..122 CDD:193602 90/95 (95%)
LIM1_Prickle 130..188 CDD:188799 52/57 (91%)
LIM2_Prickle 193..248 CDD:188802 51/54 (94%)
LIM3_Prickle 253..311 CDD:188804 51/57 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 314..350 21/35 (60%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 481..519 9/37 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 639..709 32/70 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 822..844 15/21 (71%)
prickle2bXP_068080220.1 PET_Prickle 82..178 CDD:193602 90/95 (95%)
LIM1_Prickle 186..244 CDD:188799 52/57 (91%)
LIM2_Prickle 249..304 CDD:188802 51/54 (94%)
LIM3_Prickle 309..367 CDD:188804 51/57 (89%)

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