DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PRICKLE2 and Prickle2

DIOPT Version :10

Sequence 1:NP_942559.1 Gene:PRICKLE2 / 166336 HGNCID:20340 Length:844 Species:Homo sapiens
Sequence 2:NP_001391015.1 Gene:Prickle2 / 243548 MGIID:1925144 Length:937 Species:Mus musculus


Alignment Length:845 Identity:804/845 - (95%)
Similarity:827/845 - (97%) Gaps:1/845 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MVTVMPLEMEKTISKLMFDFQRNSTSDDDSGCALEEYAWVPPGLKPEQVHQYYSCLPEEKVPYVN 65
            ||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||
Mouse    93 MVTVMPLEMEKTISKLMFDFQRSSTSDDDSGCALEEYAWVPPGLKPEQVHQYYSCLPEEKVPYVN 157

Human    66 SPGEKLRIKQLLHQLPPHDNEVRYCNSLDEEEKRELKLFSSQRKRENLGRGNVRPFPVTMTGAIC 130
            |.||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||||
Mouse   158 SAGEKLRIKQLLHQLPPHDNEVRYCNSLDEEEKRELKLFSNQRKRENLGRGNVRPFPVTMTGAIC 222

Human   131 EQCGGQINGGDIAVFASRAGHGVCWHPPCFVCTVCNELLVDLIYFYQDGKIYCGRHHAECLKPRC 195
            |||||||.||||||||||||||:||||||||||||||||||||||||||||||||||||||||||
Mouse   223 EQCGGQIKGGDIAVFASRAGHGICWHPPCFVCTVCNELLVDLIYFYQDGKIYCGRHHAECLKPRC 287

Human   196 AACDEIIFADECTEAEGRHWHMKHFCCFECETVLGGQRYIMKEGRPYCCHCFESLYAEYCDTCAQ 260
            ||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||
Mouse   288 AACDEIIFADECTEAEGRHWHMRHFCCFECETVLGGQRYIMKEGRPYCCHCFESLYAEYCDTCAQ 352

Human   261 HIGIDQGQMTYDGQHWHATETCFCCAHCKKSLLGRPFLPKQGQIFCSRACSAGEDPNGSDSSDSA 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   353 HIGIDQGQMTYDGQHWHATETCFCCAHCKKSLLGRPFLPKQGQIFCSRACSAGEDPNGSDSSDSA 417

Human   326 FQNARAKESRRSAKIGKNKGKTEEPMLNQHSQLQVSSNRLSADVDPLSLQMDMLSLSSQTPSLNR 390
            ||||||||||||||||||||||||.|||||||||||||||||||||||:|||:||||||||||||
Mouse   418 FQNARAKESRRSAKIGKNKGKTEEAMLNQHSQLQVSSNRLSADVDPLSVQMDLLSLSSQTPSLNR 482

Human   391 DPIWRSREEPYHYGNKMEQNQTQSPLQLLSQCNIRTSYSPGGQGAGAQPEMWGKHFSNPKRSSSL 455
            ||||||||||:||||||||||:|||||||||||||||||||||||||||:||.|||||||||||:
Mouse   483 DPIWRSREEPFHYGNKMEQNQSQSPLQLLSQCNIRTSYSPGGQGAGAQPDMWAKHFSNPKRSSSM 547

Human   456 AMTGHAGSFIKECREDYYPGRLRSQESYSDMSSQSFSETRGSIQVPKY-EEEEEEEGGLSTQQCR 519
            |:.||.||||:|||||||||||.|||||||||||||:||||||.|||| |||||||||:||||||
Mouse   548 ALKGHGGSFIQECREDYYPGRLMSQESYSDMSSQSFNETRGSIPVPKYEEEEEEEEGGISTQQCR 612

Human   520 TRHPISSLKYTEDMTPTEQTPRGSMESLALSNATGLSADGGAKRQEHLSRFSMPDLSKDSGMNVS 584
            .|.|:|||||||||||||||||||||||||||||||||:||||||||||||||||||||||||||
Mouse   613 PRRPLSSLKYTEDMTPTEQTPRGSMESLALSNATGLSAEGGAKRQEHLSRFSMPDLSKDSGMNVS 677

Human   585 EKLSNMGTLNSSMQFRSAESVRSLLSAQQYQEMEGNLHQLSNPIGYRDLQSHGRMHQSFDFDGGM 649
            |||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||:
Mouse   678 EKLSNMGTLNSSMQFRSAESVRSLLSAQQYQEMEGNLHQLSNPLGYRDLQSHGRMHQSFDFDGGI 742

Human   650 AGSKLPGQEGVRIQPMSERTRRRATSRDDNRRFRPHRSRRSRRSRSDNALHLASEREAISRLKDR 714
            |.|||||||||.|||||||||||.|||||||||||||||||||||||||||||||||.|:|||:|
Mouse   743 ASSKLPGQEGVHIQPMSERTRRRTTSRDDNRRFRPHRSRRSRRSRSDNALHLASEREVIARLKER 807

Human   715 PPLRAREDYDQFMRQRSFQESMGHGSRRDLYGQCPRTVSDLALQNAFGDRWGPYFAEYDWCSTCS 779
            |||||||||||||||||||||:|.|||||||.||||||||||||||||:||||||.|||||||||
Mouse   808 PPLRAREDYDQFMRQRSFQESLGQGSRRDLYSQCPRTVSDLALQNAFGERWGPYFTEYDWCSTCS 872

Human   780 SSSESDNEGYFLGEPIPQPARLRYVTSDELLHKYSSYGLPKSSTLGGRGQLHSRKRQKSKNCIIS 844
            ||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||||||
Mouse   873 SSSESDNEGYFLGEPIPQPARLRYVTSDELLHKYSSYGVPKSSTLGGRGQLHSRKRQKSKNCIIS 937

Human   845  844
            Mouse   938  937

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PRICKLE2NP_942559.1 PET_Prickle 26..122 CDD:193602 93/95 (98%)
LIM1_Prickle 130..188 CDD:188799 55/57 (96%)
LIM2_Prickle 193..248 CDD:188802 53/54 (98%)
LIM3_Prickle 253..311 CDD:188804 57/57 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 314..350 35/35 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 481..519 34/38 (89%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 639..709 64/69 (93%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 822..844 21/21 (100%)
Prickle2NP_001391015.1 PET_Prickle 118..214 CDD:193602 93/95 (98%)
LIM1_Prickle 222..280 CDD:188799 55/57 (96%)
LIM2_Prickle 285..340 CDD:188802 53/54 (98%)
LIM3_Prickle 345..403 CDD:188804 57/57 (100%)

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