DRSC/TRiP Functional Genomics Resources

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Protein Alignment Serpina3c and Spn42Dd

DIOPT Version :10

Sequence 1:XP_011242304.1 Gene:Serpina3c / 16625 MGIID:102848 Length:436 Species:Mus musculus
Sequence 2:NP_001163067.1 Gene:Spn42Dd / 49808 FlyBaseID:FBgn0028988 Length:372 Species:Drosophila melanogaster


Alignment Length:383 Identity:126/383 - (32%)
Similarity:189/383 - (49%) Gaps:31/383 - (8%)


- Green bases have known domain annotations that are detailed below.


Mouse    64 LTLASINTDFAFSLYKKLALKNPDTNIVFSPLSISAALAIVSLGAKGNTLEEILEGLNFNLTETP 128
            |.:.|:....:..:|:.|:..:.:.|:|.||:||...|::|.:||:|:|.:|:...|... :|..
  Fly     8 LWVTSVACQTSKEIYQLLSKSHTNQNLVVSPVSIETILSMVFMGAEGSTAKELQSALGLP-SEDK 71

Mouse   129 EADIHQGFGHLLQRLSHPGEQVQISTGSALFVEKHLQILAEFQEKARALYQAEAFTADFQQPLEA 193
            || :...:|.||..|....|...:...:.::|.....:...:....|..:::||.:........|
  Fly    72 EA-VAARYGALLNDLQGQEEGPILKLANRIYVNDQYSLNQNYNLAVREPFKSEAESISLTNGPVA 135

Mouse   194 TKLINDYVSNQTQRKIKGLI--SDLDTDTLMVLVNYIYFKGKWKMPFNPRDTFESEFYLDVKRSV 256
            .:.||.:|.:||..||||:|  ..:.:|...:|||.|||||:|:..|:|..|..|.|.:...:||
  Fly   136 AERINQWVLDQTSGKIKGMIDPGSMTSDVKALLVNAIYFKGQWESKFDPAKTRASTFQVTANKSV 200

Mouse   257 KVPMM-KIKTLTTPYFRDEELSCTVVELKY-KGNASALFILPDQGRMQQVEASLQPETLRKWKNS 319
            .|.|| ::.|....||||  |...|:||.| ..|.|....||     ::||.....|  .|....
  Fly   201 PVQMMAQMGTFRANYFRD--LDAQVIELPYLNSNLSMTIFLP-----REVEGLSALE--EKIVGF 256

Mouse   320 LRPRKMGELY--LPKFSISTDYSLKNILPELGIKEIFSKQADLSGI----TGTKDLIVSQMVHKA 378
            .||....|:|  ||||.|.....||..|.:|||:|:|:.::||||:    :|.|   |||:.|||
  Fly   257 ARPLVAKEVYLKLPKFKIEFRDELKETLEKLGIRELFTDKSDLSGLFADKSGGK---VSQVSHKA 318

Mouse   379 VLDVAETGTEGVAATGVNFRILSR---RTSLWFNRTFLMVISHTDVQTTLFIAKITHP 433
            .|:|.|.|.|...||.|  .:.:|   .|.|..:..|..||  .|..|..|..::..|
  Fly   319 FLEVNEEGAEAAGATSV--AVTNRAGFSTFLMADHPFAFVI--RDANTIYFQGRVVSP 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Serpina3cXP_011242304.1 serpinA3_A1AC 56..434 CDD:381019 126/383 (33%)
Spn42DdNP_001163067.1 serpin42Dd-like_insects 12..372 CDD:381070 124/377 (33%)

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