DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DDX10 and pit

DIOPT Version :10

Sequence 1:NP_004389.2 Gene:DDX10 / 1662 HGNCID:2735 Length:875 Species:Homo sapiens
Sequence 2:NP_524446.3 Gene:pit / 42595 FlyBaseID:FBgn0266581 Length:680 Species:Drosophila melanogaster


Alignment Length:486 Identity:194/486 - (39%)
Similarity:310/486 - (63%) Gaps:32/486 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    76 LSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLEALYRLQWTSTD 140
            :|:.||:.::|..:..:||||.:::...|:|:|::|||:||||||||||:|.:|.:.:|::...:
  Fly   194 VSEATLRAIKEMGFTEMTEIQSKSLTPLLKGRDLVGAAQTGSGKTLAFLIPAVELINKLRFMPRN 258

Human   141 GLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGGKDLKHEAERI-NNINILVCTPGRLLQH 204
            |.||:||||||||:.|||.||:::..:|..:.||::||.:.:.|:|:: ..|||||.||||||.|
  Fly   259 GTGVIIISPTRELSMQTFGVLKELMAHHHHTYGLVMGGSNRQVESEKLGKGINILVATPGRLLDH 323

Human   205 MDETVSFHATDLQMLVLDEADRILDMGFADTMNAVIENLPKKRQTLLFSATQTKSVKDLARLSLK 269
            :..:..|...:||.|::||.||||::||.:.:..:|..|||:|||:|||||||..::.|::|:||
  Fly   324 LQNSPDFLYKNLQCLIIDEVDRILEIGFEEELKQIINLLPKRRQTMLFSATQTARIEALSKLALK 388

Human   270 N-PEYVWVHEKAKYSTPATLEQNYIVCELQQKISVLYSFLRSHLKKKSIVFFSSCKEVQYLYRVF 333
            : |.||.||:....:|...|||.||||..::::.||::||:.:.|||.:||||||..|:|.:.:|
  Fly   389 SEPIYVGVHDNQDTATVDGLEQGYIVCPSEKRLLVLFTFLKKNRKKKVMVFFSSCMSVKYHHELF 453

Human   334 CRLRPGVSILALHGRQQQMRRMEVYNEFVRKRAAVLFATDIAARGLDFPAVNWVLQFDCPEDANT 398
            ..:  .:.:.::||:|:|.:|...:.:|....:.:|..||:||||||.|.|:|::|:|.|:|...
  Fly   454 NYI--DLPVTSIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPQVDWIVQYDPPDDPRE 516

Human   399 YIHRAGRTARYK-EDGEALLILLPSEKAMVQQLLQKKVPVKEIKINPEKLIDVQKKLESILAQDQ 462
            ||||.|||||.. ..|.|||::.|.|...::.|...|||:.|.:.:.:|:.|:|.:||.::|::.
  Fly   517 YIHRVGRTARGSGTSGHALLLMRPEELGFLRYLKAAKVPLNEFEFSWQKIADIQLQLEKLIAKNY 581

Human   463 DLKERAQRCFVSYVRSVYLMKDKEVFDVSKLPIPEYALSLGLAVAPRV----------------- 510
            .|.:.|:..|.||||:....:.|::|:|:.|.:...|.|.|..|.|.|                 
  Fly   582 FLNQSAKEAFKSYVRAYDSHQLKQIFNVNTLDLQAVAKSFGFLVPPVVDLKVGAAKRERPEKRVG 646

Human   511 ----RFLQKM------QKQPTKELVRSQADK 531
                .|.:||      :::..|::.|.||.|
  Fly   647 GGGFGFYKKMNEGSASKQRHFKQVNRDQAKK 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DDX10NP_004389.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..43
SrmB 68..470 CDD:440279 171/396 (43%)
Q motif 69..97 7/20 (35%)
DEADc_DDX10 80..277 CDD:350699 94/198 (47%)
DEAD box 222..225 2/2 (100%)
DUF4217 451..509 CDD:464056 19/57 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 562..631
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 703..850
pitNP_524446.3 DEADc_DDX18 198..395 CDD:350700 93/196 (47%)
SF2_C_DEAD 408..537 CDD:350174 57/130 (44%)
DUF4217 570..627 CDD:464056 19/56 (34%)
Blue background indicates that the domain is not in the aligned region.

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