DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Klf9 and btd

DIOPT Version :9

Sequence 1:NP_034768.2 Gene:Klf9 / 16601 MGIID:1333856 Length:244 Species:Mus musculus
Sequence 2:NP_511100.1 Gene:btd / 31912 FlyBaseID:FBgn0000233 Length:644 Species:Drosophila melanogaster


Alignment Length:140 Identity:62/140 - (44%)
Similarity:77/140 - (55%) Gaps:31/140 - (22%)


- Green bases have known domain annotations that are detailed below.


Mouse   103 SGSSPSHSPEERQDSGSAPSPLSLLHSGVASKGKHASEKRHKCPYSGCGKVYGKSSHLKAHYRVH 167
            ||..|...|:||                        ..|:|.|...||.::|||:||||.|.|.|
  Fly   317 SGLPPIVGPDER------------------------GRKQHICHIPGCERLYGKASHLKTHLRWH 357

Mouse   168 TGERPFPCTWPDCLKKFSRSDELTRHYRTHTGEKQFRCPLCEKRFMRSDHLTKHARRHTEFHPSM 232
            ||||||.|.  .|.|:|||||||.||.||||..:.:.||:|.|:|.|||||:||.:.|.:     
  Fly   358 TGERPFLCL--TCGKRFSRSDELQRHGRTHTNYRPYACPICSKKFSRSDHLSKHKKTHFK----- 415

Mouse   233 IKRSKKALAS 242
            .|:|||.||:
  Fly   416 DKKSKKVLAA 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Klf9NP_034768.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 26..51
COG5048 <78..234 CDD:227381 56/130 (43%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 79..143 7/39 (18%)
C2H2 Zn finger 145..167 CDD:275368 12/21 (57%)
C2H2 Zn finger 175..197 CDD:275368 13/21 (62%)
C2H2 Zn finger 205..225 CDD:275368 12/19 (63%)
btdNP_511100.1 C2H2 Zn finger 338..357 CDD:275368 11/18 (61%)
zf-H2C2_2 349..374 CDD:290200 16/26 (62%)
C2H2 Zn finger 365..385 CDD:275368 13/21 (62%)
zf-H2C2_2 377..402 CDD:290200 13/24 (54%)
zf-C2H2 391..413 CDD:278523 12/21 (57%)
C2H2 Zn finger 393..413 CDD:275368 12/19 (63%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.