DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif5c and cmet

DIOPT Version :9

Sequence 1:NP_032475.2 Gene:Kif5c / 16574 MGIID:1098269 Length:956 Species:Mus musculus
Sequence 2:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster


Alignment Length:1229 Identity:309/1229 - (25%)
Similarity:493/1229 - (40%) Gaps:374/1229 - (30%)


- Green bases have known domain annotations that are detailed below.


Mouse     8 SIKVMCRFRPLNEAEILRGDKFIPKFKGEETVVI--GQGKPYVFDRVLPPNTTQEQVYNACAKQI 70
            ||:|..:.||...     |...:.:.|...::.:  ...:|||||.|.....:.::|::..||.|
  Fly     8 SIQVCIKVRPCEP-----GLTSLWQVKERRSIHLADSHAEPYVFDYVFDEGASNQEVFDRMAKHI 67

Mouse    71 VKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDPQLMGIIPRIAHDIFDHIYSMDENLEFHIKVSY 135
            |...::|:|||||||||||||||:||.|   |.|..|::...|.:||..|.|..|. :|.::|.|
  Fly    68 VHACMQGFNGTIFAYGQTSSGKTYTMMG---DEQNPGVMVLAAKEIFQQISSETER-DFLLRVGY 128

Mouse   136 FEIYLDKIRDLLDVSKTNLAVHEDKNRVPYVKGCTERFVSSPEEVMDVIDEGKANRHVAVTNMNE 200
            .|||.:||.|||:....:|.:||..|.:..| .|.|..::|..:::.::..|...|.|..|||||
  Fly   129 IEIYNEKIYDLLNKKNQDLKIHESGNGIVNV-NCEECIITSEVDLLRLLCLGNKERTVGETNMNE 192

Mouse   201 HSSRSHSIFLINI---KQENVETEKKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSAL 262
            .|||||:||.|.|   |.::.:.:..:...|.||||||||:..:|||.||.|.|..:|||||..|
  Fly   193 RSSRSHAIFKIIIESRKSDHSDDDAVIQSVLNLVDLAGSERADQTGARGARLKEGGHINKSLLFL 257

Mouse   263 GNVISALAEGTKTH-VPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKT 326
            .|||.:|:|..... ..|||||:|||||.|||||..|:|:....||:..|::  |||.|..|||.
  Fly   258 SNVIKSLSENADNRFTNYRDSKLTRILQASLGGNAFTSIICTIKPSIMEESQ--STLSFATRAKK 320

Mouse   327 IKNTVSVN-----------LELTAEEWKKKYEKEKEKNKALKSVLQHLEMELNR----------- 369
            |:....||           ||...:..|.|..:|:.||:..:.| :|||.::..           
  Fly   321 IRIKPQVNEMVSDATMMKRLEREIKVLKDKLAEEERKNENQQKV-EHLERQIKHDMHKIICGHSL 384

Mouse   370 -----------W---RNGEAVPEDEQISAKDQKSLEP-------------------CDNTPIIDN 401
                       |   .:|..:...|..:.:|:....|                   .||.|...|
  Fly   385 SDKGQQKRRRTWCPTASGSHLELAETGTTEDRIDQFPKVSHLPKPVFFHTSNAGKRWDNIPKTIN 449

Mouse   402 ITPVVDGISAEKEKYDEEITS------------------LYRQLDD---------KDDEINQQSQ 439
            |...:| |..|.....||...                  ..|||.|         ..|:|.::.|
  Fly   450 ILGSLD-IGTESNSISEEFLPAECIDFGSPRPDVLKPMLTIRQLPDLPLTPKGPLTTDKIKKEIQ 513

Mouse   440 ---------------------LAEKLKQQMLDQDEL----LASTRRDYEKIQEELTRLQIENEAA 479
                                 |.|||.:....:|.|    ||...| |:.:::|:|.|:.:||||
  Fly   514 DLQMFTSLEKHFEVECEEVQGLKEKLAEVTAQRDNLEQESLAEKER-YDALEKEVTSLRADNEAA 577

Mouse   480 KDEVKEVLQALEEL---------------AVNYDQKSQEVEDKTRANEQLTDELAQKTTTLTTTQ 529
            ..::.|:.:.|..|               .:.::.::.:...|.|.:: |...|.:|.:|:.:.|
  Fly   578 NSKISELEEKLSTLKQTMRIMEVENQVAVGLEFEFEAHKKSSKLRVDD-LLSALLEKESTIESLQ 641

Mouse   530 RELSQL--------------------------------QELSN-----HQKKRATEILNLLLK-- 555
            :.|..|                                :||..     ..||.:.|...|.|:  
  Fly   642 KSLDNLTRDVLRNSKEGHMLSIAPEQEDIAGDSICNKCEELEKLIADLESKKNSCECDQLRLEIV 706

Mouse   556 -------------------------DLGEIGGIIGTND-----------------------VKTL 572
                                     |...:...:.|:.                       :.||
  Fly   707 SVRDKLESVESAFNLASSEIIQKATDCERLSKELSTSQNAFGQLQERYDALDQQWQAQQAGITTL 771

Mouse   573 ADVNGVIEEEFTMARLYISKMKSEVKSLVNRSKQLESAQ----MDSNRKMNA-----SER----- 623
            .:.:..::|::       .|::.|.:.|.:|::...||:    .:.|.|..|     :||     
  Fly   772 HEKHEHVQEKY-------QKLQEEYEQLESRARSASSAEFQRLQNDNTKFQADIASLNERLEEAQ 829

Mouse   624 ---------ELAACQLLISQHE--AKIKSLTDYMQNMEQK----RRQLEES---QDSLSEELAK- 669
                     |....:|.|..||  ||||.|....:.|:::    ..||.||   .|:|.||:.: 
  Fly   830 NMLTEVQNSESTVEKLRIQNHELTAKIKELETNFEEMQREYDCLSNQLMESVQENDALREEIKQR 894

Mouse   670 --LRAQEKM-------------------HEV-----SFQDKEKEH---LTRLQDAEEVK------ 699
              ...:|.|                   |:.     |.|..|.:|   ::||..|.::|      
  Fly   895 PTSHVEESMRSSGISSDFDEQKQDINLLHQFVQLSESVQQIELQHHSGISRLFRANQMKLDQSEP 959

Mouse   700 ------KALEQQMESHREA--------------HQKQLSRLRDE---IEEKQRIIDEIRDLNQKL 741
                  ::.|...|.:|::              |:.|:.||..|   :.|::|::|.|..|.|::
  Fly   960 GLKLCLESAEYIEEDNRQSDATEPICLKGFLKRHRFQIKRLSQEHVDMGEEKRLLDIISQLEQEI 1024

Mouse   742 QLE---QERLSSDYNKLKIEDQERE-VKLEKLLLLNDKREQAREDLKGLEETVSRELQTLHNLRK 802
            :.:   .|...:..|:::.:....| ..|||.:::| |.|..:..::.||:..:........|  
  Fly  1025 EEKSALMEATEATINEMREQMTNLESALLEKSVIIN-KVEDYQRQIESLEKQNAEMTMVYEEL-- 1086

Mouse   803 LFVQDLTTRVKKSVEL------DSDDGGG----SAAQKQKISFLENNLEQLTKVHKQLVRDNADL 857
               ||..||.....|.      |.|...|    .:.::|:::.|:.:   :|::..|:    :||
  Fly  1087 ---QDRVTRESSMSESLLRVPPDEDTLPGCPTSPSRREQEVATLKTS---ITELQSQV----SDL 1141

Mouse   858 RCEL--------------PKLEKRLRATAERVKALESALKEAKENAMRDRKRYQQEVDR 902
            :.||              .:|:......:||..::|..|.|..|    |.|:.|:.:||
  Fly  1142 KAELENHLRQIQLKDGNIARLQTDFEEMSERCLSMEVRLAELDE----DTKQKQELLDR 1196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif5cNP_032475.2 KISc_KHC_KIF5 6..327 CDD:276820 137/324 (42%)
KISc 8..334 CDD:214526 138/331 (42%)
Microtubule-binding 174..315 66/144 (46%)
Lebercilin 605..798 CDD:292252 62/287 (22%)
BAR 636..817 CDD:299863 56/252 (22%)
Globular 859..956 14/58 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 910..956
cmetNP_524993.3 KISc 8..328 CDD:214526 138/331 (42%)
Motor_domain 8..321 CDD:277568 137/324 (42%)
Smc <680..1449 CDD:224117 107/541 (20%)
TMPIT 779..>867 CDD:285135 22/94 (23%)
Smc 1042..1910 CDD:224117 38/172 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000669
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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