DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kif5c and Khc

DIOPT Version :9

Sequence 1:NP_032475.2 Gene:Kif5c / 16574 MGIID:1098269 Length:956 Species:Mus musculus
Sequence 2:NP_476590.1 Gene:Khc / 36810 FlyBaseID:FBgn0001308 Length:975 Species:Drosophila melanogaster


Alignment Length:984 Identity:601/984 - (61%)
Similarity:750/984 - (76%) Gaps:64/984 - (6%)


- Green bases have known domain annotations that are detailed below.


Mouse     4 PAECSIKVMCRFRPLNEAEILRGDKFIPKFKG--EETVVIGQGKPYVFDRVLPPNTTQEQVYNAC 66
            |||.||||:|||||||::|...|.||:.||..  ||..:...||.|:||:|..||.:||:|||..
  Fly     8 PAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIAGKVYLFDKVFKPNASQEKVYNEA 72

Mouse    67 AKQIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDPQLMGIIPRIAHDIFDHIYSMDENLEFHI 131
            ||.||.|||.||||||||||||||||||||||.:.|....||||||.:|||:|||:|:.||||||
  Fly    73 AKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHI 137

Mouse   132 KVSYFEIYLDKIRDLLDVSKTNLAVHEDKNRVPYVKGCTERFVSSPEEVMDVIDEGKANRHVAVT 196
            ||||:|||:|||||||||||.||:|||||||||||||.|||||||||:|.:||:|||:|||:|||
  Fly   138 KVSYYEIYMDKIRDLLDVSKVNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVT 202

Mouse   197 NMNEHSSRSHSIFLINIKQENVETEKKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNINKSLSA 261
            |||||||||||:||||:||||:|.:|||||||||||||||||||||||||.||||||||||||||
  Fly   203 NMNEHSSRSHSVFLINVKQENLENQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSA 267

Mouse   262 LGNVISALAEGTKTHVPYRDSKMTRILQDSLGGNCRTTIVICCSPSVFNEAETKSTLMFGQRAKT 326
            |||||||||:|.|||:||||||:|||||:|||||.||||||||||:.|||:||||||.||:||||
  Fly   268 LGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSPASFNESETKSTLDFGRRAKT 332

Mouse   327 IKNTVSVNLELTAEEWKKKYEKEKEKNKALKSVLQHLEMELNRWRNGEAVPEDEQISAKDQKSLE 391
            :||.|.||.||||||||::||||||||..||..::.||:||.|||.||.|..:|||:.:|     
  Fly   333 VKNVVCVNEELTAEEWKRRYEKEKEKNARLKGKVEKLEIELARWRAGETVKAEEQINMED----- 392

Mouse   392 PCDNTPIIDNITPVVD---------------------GISA-----EKEKYDEEITSLYRQLDDK 430
                  :::..||.::                     .:||     |:.:...|...||:|||||
  Fly   393 ------LMEASTPNLEVEAAQTAAAEAALAAQRTALANMSASVAVNEQARLATECERLYQQLDDK 451

Mouse   431 DDEINQQSQLAEKLKQQMLDQDELLASTRRDYEKIQEELTRLQIENEAAKDEVKEVLQALEELAV 495
            |:|||||||.||:||:|:::|:||:|:.||:||.:|.|:.|:|.|||:||:||||||||||||||
  Fly   452 DEEINQQSQYAEQLKEQVMEQEELIANARREYETLQSEMARIQQENESAKEEVKEVLQALEELAV 516

Mouse   496 NYDQKSQEVEDKTRANEQLTDELAQKTTTLTTTQRELSQLQELSNHQKKRATEILNLLLKDLGEI 560
            ||||||||:::|.:..:.|.:||.||.:.......||.||:::|:|||||.||:|..||:||||:
  Fly   517 NYDQKSQEIDNKNKDIDALNEELQQKQSVFNAASTELQQLKDMSSHQKKRITEMLTNLLRDLGEV 581

Mouse   561 GGIIGTND------VKTLADVN-GVIEEEFTMARLYISKMKSEVKSLVNRSKQLESAQMDSNRKM 618
            |..|...:      :..||..: ..:||:||||||:|||||:|.|::..|...:|:.|.|||:|:
  Fly   582 GQAIAPGESSIDLKMSALAGTDASKVEEDFTMARLFISKMKTEAKNIAQRCSNMETQQADSNKKI 646

Mouse   619 NASERELAACQLLISQHEAKIKSLTDYMQNMEQKRRQLEESQDSLSEELAKLRAQEKMHEVSFQD 683
            :..|::|...:||||||||::|||.:.|:..|.|:|.|||..|||.||.|||:|.|.:..|:.::
  Fly   647 SEYEKDLGEYRLLISQHEARMKSLQESMREAENKKRTLEEQIDSLREECAKLKAAEHVSAVNAEE 711

Mouse   684 KEKEHLTRLQDAEEVKKALEQQMESHREAHQKQLSRLRDEIEEKQRIIDEIRDLNQKLQLEQERL 748
            |::        |||::...:.||:..||||.:|:|.|||||..||..:||::|::|||.|..:::
  Fly   712 KQR--------AEELRSMFDSQMDELREAHTRQVSELRDEIAAKQHEMDEMKDVHQKLLLAHQQM 768

Mouse   749 SSDYNKLKIEDQEREVKLEKLLLLNDKREQAREDLKGLEETVSRELQTLHNLRKLFVQDLTTRVK 813
            ::||.|::.||.|:..:|:.::|.|::|||||:||||||:||::||||||||||||||||..|::
  Fly   769 TADYEKVRQEDAEKSSELQNIILTNERREQARKDLKGLEDTVAKELQTLHNLRKLFVQDLQQRIR 833

Mouse   814 KS-VELDSDDGGGSAAQKQKISFLENNLEQLTKVHKQLVRDNADLRCELPKLEKRLRATAERVKA 877
            |: |..:|::.|||.|||||||||||||:||||||||||||||||||||||||||||.|.|||||
  Fly   834 KNVVNEESEEDGGSLAQKQKISFLENNLDQLTKVHKQLVRDNADLRCELPKLEKRLRCTMERVKA 898

Mouse   878 LESALKEAKENAMRDRKRYQQEVDRIKEAVRAKNMARRAHSAQIAKPIRPGHYPASSPTAVHAVR 942
            ||:|||||||.|||||||||.||||||||||.|::.||...||||||||.|.       ...|:|
  Fly   899 LETALKEAKEGAMRDRKRYQYEVDRIKEAVRQKHLGRRGPQAQIAKPIRSGQ-------GAIAIR 956

Mouse   943 GGG--GGSS 949
            |||  ||.|
  Fly   957 GGGAVGGPS 965

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif5cNP_032475.2 KISc_KHC_KIF5 6..327 CDD:276820 248/322 (77%)
KISc 8..334 CDD:214526 251/327 (77%)
Microtubule-binding 174..315 119/140 (85%)
Lebercilin 605..798 CDD:292252 89/192 (46%)
BAR 636..817 CDD:299863 89/181 (49%)
Globular 859..956 65/93 (70%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 910..956 20/42 (48%)
KhcNP_476590.1 KISc_KHC_KIF5 10..333 CDD:276820 248/322 (77%)
KISc 12..340 CDD:214526 251/327 (77%)
Apolipoprotein 595..744 CDD:279749 70/156 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 643 1.000 Domainoid score I164
eggNOG 1 0.900 - - E2759_KOG0240
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1143 1.000 Inparanoid score I212
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52972
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000669
OrthoInspector 1 1.000 - - otm42515
orthoMCL 1 0.900 - - OOG6_100344
Panther 1 1.100 - - O PTHR24115
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2595
SonicParanoid 1 1.000 - - X952
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.860

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