Protein Alignment Kif3a and ncd

DIOPT Version :10

• Sequence 1: XP_006532388.1
• Gene: Kif3a / 16568
• MGIID: 107689
• Length: 725
• Species: Mus musculus
• Sequence 2: NP_476651.1
• Gene: ncd / 43517
• FlyBaseID: FBgn0002924
• Length: 700
• Species: Drosophila melanogaster
• Alignment Length: 354
• Identity: 136/354 - (38%)
• Similarity: 194/354 - (54%)
• Gaps: 38/354 - (10%)

Mouse    14 NVKVVVRCR-PLNEREKSMC----YRQAVSVDEMRGTITVHKTDS---SNEPPKTFTFDTVFGPE 70
            |::|..|.| ||...|..||    |.     ||  .|:.:...|:   |....:.|:||.||.|.
  Fly   348 NIRVFCRIRPPLESEENRMCCTWTYH-----DE--STVELQSIDAQAKSKMGQQIFSFDQVFHPL 405

Mouse    71 SKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPGLRGVIPNSFAHIFGHIA 135
            |.|.|::.:.: |:|.|.|:|||..||||||||:|||:||:|   ||...||||.:...:|..|.
  Fly   406 SSQSDIFEMVS-PLIQSALDGYNICIFAYGQTGSGKTYTMDG---VPESVGVIPRTVDLLFDSIR 466

Mouse   136 KAEG-DTRFLVRVSYLEIYNEEVRDLLG---KDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMD 196
            .... ...:.::.::||||||.:.|||.   ||...|:....:.|  :|:.:::...|.:.:.:.
  Fly   467 GYRNLGWEYEIKATFLEIYNEVLYDLLSNEQKDMEIRMAKNNKND--IYVSNITEETVLDPNHLR 529

Mouse   197 RIMTLGHKNRSVGATNMNEHSSRSHAIFTITI--ECSEKGVDGNMHVRMGKLHLVDLAGSERQAK 259
            .:|.....||:..:|..||.||||||:..:.:  ..:||     ..:.:|.::||||||||
  Fly   530 HLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEK-----QEISVGSINLVDLAGSE---- 585

Mouse   260 TGATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGP 324
            :..|..|:.|...||.|||.|.|||.||:. |..|:||||||||.||..||||||||:|..|:.|
  Fly   586 SPKTSTRMTETKNINRSLSELTNVILALLQ-KQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSP 649

Mouse   325 ADYNYDETISTLRYANRAKNIK-NKARIN 352
            ....:.|::.:||:|....:.| .||:.|
  Fly   650 FQDCFQESVKSLRFAASVNSCKMTKAKRN 678

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Kif3a	XP_006532388.1	KISc_KIF3	13..345	CDD:276822	132/344 (38%)
		Smc	<450..>614	CDD:440809
ncd	NP_476651.1	PRK03918	<204..350	CDD:235175	1/1 (100%)
		KISc_C_terminal	346..672	CDD:276817	132/346 (38%)