DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3a and Klp68D

DIOPT Version :10

Sequence 1:XP_006532388.1 Gene:Kif3a / 16568 MGIID:107689 Length:725 Species:Mus musculus
Sequence 2:NP_524029.2 Gene:Klp68D / 39332 FlyBaseID:FBgn0004381 Length:784 Species:Drosophila melanogaster


Alignment Length:736 Identity:291/736 - (39%)
Similarity:444/736 - (60%) Gaps:72/736 - (9%)


- Green bases have known domain annotations that are detailed below.


Mouse     6 SEKPESCDNVKVVVRCRPLNEREKSMCYRQAVSVDEMRGTITVHK-TDSSNEPPKTFTFDTVFGP 69
            |:.|..|  |:|||||||::.||:|....:.|:|...||.:.:.. .|.:.|..|.||:|..:..
  Fly    13 SQTPNEC--VQVVVRCRPMSNRERSERSPEVVNVYPNRGVVELQNVVDGNKEQRKVFTYDAAYDA 75

Mouse    70 ESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPGLRGVIPNSFAHIFGHI 134
            .:.|..:|:....|::.|||||:||.|||||||||||||||||||....|.|:||.:|..|:.||
  Fly    76 SATQTTLYHEVVFPLVSSVLEGFNGCIFAYGQTGTGKTFTMEGVRGNDELMGIIPRTFEQIWLHI 140

Mouse   135 AKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEVKERPDVGVYIKDLSAYVVNNADDMDRIM 199
            .:.| :.:|||.|||||||.||:|||| |..::.|||:||.. |||:.:|.|....:.:||.::|
  Fly   141 NRTE-NFQFLVDVSYLEIYMEELRDLL-KPNSKHLEVRERGS-GVYVPNLHAINCKSVEDMIKVM 202

Mouse   200 TLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATG 264
            .:|:|||:||.||||||||||||||.|.||..:...:   .:::|||:|:||||||||:||||:.
  Fly   203 QVGNKNRTVGFTNMNEHSSRSHAIFMIKIEMCDTETN---TIKVGKLNLIDLAGSERQSKTGASA 264

Mouse   265 QRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADYNY 329
            :|||||:||||:||:||||||||.: .|.|||||:|||||||||||||||||:|.|||||::|||
  Fly   265 ERLKEASKINLALSSLGNVISALAE-SSPHVPYRDSKLTRLLQDSLGGNSKTIMIANIGPSNYNY 328

Mouse   330 DETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEEGEEVSGSDISGSEEDDEE 394
            :||::|||||:|||:|:|:...||||:||.|:::|:|||.||:.:...::         :..:::
  Fly   329 NETLTTLRYASRAKSIQNQPIKNEDPQDAKLKEYQEEIERLKRLIGPQQQ---------QRSEKQ 384

Mouse   395 GELGEDGEKKKKRRGSSSSSSSDSTCSVIEKPLDEFLPHQAGKKKVSPDKMVEMQAKIDEERKAL 459
            ....:...||.|:...:...|.....|.||:|:::                       |.:.:..
  Fly   385 VTAKKQRVKKPKKETVTKEMSDSLQVSTIEQPVED-----------------------DSDPEGA 426

Mouse   460 ETKLDMEEEERNKARAELERREKDLLKAQQEHQSLLEKLSALEKKVIVGGVDLLAKAEEQEKLLE 524
            |::.|.|.|      ||:.:..::|.:.:.|:..|..||:.||.:::.||.:||....|::..||
  Fly   427 ESESDKENE------AEVAKSNEELERERVENSKLAAKLAELEGQLVRGGKNLLDTYSERQIELE 485

Mouse   525 ESNMELEERRRRAEQLRKELEEKEQERLDIEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADL 589
            :..:|:.||::|..:::::||.:|:..|:|.|:..||::|.:.|.:||.|.:...:|.:.|:.|.
  Fly   486 KKLVEIAERKKREIEIQQQLELQEETTLEIRERNVSLEQEVELKKRKLSKCYAKYLALQQELNDC 550

Mouse   590 QQEHQREIEGLLENIRQLSRELRLQMLIIDNFIPQDYQEMIENYVHWNEDIGEWQLKCVAYT--- 651
            :.:|.:::..|.....:|.:||:.|:||||||:|.:.::.:.....::|:..||:...::..   
  Fly   551 KSDHNQDLRELEMAQNELVKELKRQLLIIDNFVPIEVKQRLYTQAKYDEEQEEWKFSSMSLPTPP 615

Mouse   652 --GNNMRKQTPVPDKKERDPFEVDLSHVYLAYTEESLRQSL---------MKLERP-RTSKGKAR 704
              ......:.||...:.|.|    .|...|...:.:...||         .:||.| ||::....
  Fly   616 GGDGKFSSKRPVSHPQRRRP----TSEYALQEAKSNSPSSLRFKSENIVNYELEMPCRTTQEYRT 676

Mouse   705 PKMGRRKRSAKPETVIDSLLQ 725
            ||:     ||..:.|:...:|
  Fly   677 PKV-----SASLQAVLAQAMQ 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3aXP_006532388.1 KISc_KIF3 13..345 CDD:276822 189/332 (57%)
Smc <450..>614 CDD:440809 46/163 (28%)
Klp68DNP_524029.2 KISc 20..351 CDD:214526 191/337 (57%)
Smc <431..>580 CDD:440809 47/154 (31%)

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