DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kif3a and Klp61F

DIOPT Version :9

Sequence 1:XP_006532388.1 Gene:Kif3a / 16568 MGIID:107689 Length:725 Species:Mus musculus
Sequence 2:NP_476818.1 Gene:Klp61F / 38135 FlyBaseID:FBgn0004378 Length:1066 Species:Drosophila melanogaster


Alignment Length:763 Identity:244/763 - (31%)
Similarity:392/763 - (51%) Gaps:91/763 - (11%)


- Green bases have known domain annotations that are detailed below.


Mouse     4 NKSEKPE--SCDNVKVVVRCRPLNEREKSMCYRQAVSVDEM--RGTITVHKTDSSNEPPKTFTFD 64
            |.|.:|:  |..|::|.||.||||.||:  |.|.|..||.:  |..:|.|..||  :..|.||||
  Fly     7 NTSRQPQKKSNQNIQVYVRVRPLNSRER--CIRSAEVVDVVGPREVVTRHTLDS--KLTKKFTFD 67

Mouse    65 TVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPGLR--------- 120
            ..|||||||.|||::...|:|:.||.|||.|:|||||||||||.||.| .....|:         
  Fly    68 RSFGPESKQCDVYSVVVSPLIEEVLNGYNCTVFAYGQTGTGKTHTMVG-NETAELKSSWEDDSDI 131

Mouse   121 GVIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEV--KERPDVGVYIKD 183
            |:||.:.:|:|..:...|  ..:.:|:||||:||||:.|||..|.|.::.:  .......|.|:.
  Fly   132 GIIPRALSHLFDELRMME--VEYTMRISYLELYNEELCDLLSTDDTTKIRIFDDSTKKGSVIIQG 194

Mouse   184 LSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHL 248
            |....|::.||:.:::..|.:.|....|.||..|||||.:|:|.:...|.|::|...:::|||:|
  Fly   195 LEEIPVHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGIEGEDMLKIGKLNL 259

Mouse   249 VDLAGSERQAKTG-ATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGG 312
            |||||||..:|.| ..|.|::|...||.||.|||.||:|||| ::.|||||.||||||||:||||
  Fly   260 VDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVD-RAPHVPYRESKLTRLLQESLGG 323

Mouse   313 NSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINED-PKDALLRQFQKEIEELKKKLEE 376
            .:||.:.|.|.|...:.:||:|||.||:|||||:||..:|:. .|..:|:::.:||::||:.|..
  Fly   324 RTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQKLTKKTVLKEYTEEIDKLKRDLMA 388

Mouse   377 GEEVSGSDISGSEEDDEEGELGEDGEKKKKRRGSSSSSSSDSTCSVIEKPLDEFLPHQAGKKKVS 441
            ..:.:|..::    ::..||:....|.:.:.....         .::.|.|.:.|.:   |:|:.
  Fly   389 ARDKNGIYLA----EETYGEITLKLESQNRELNEK---------MLLLKALKDELQN---KEKIF 437

Mouse   442 PDKMVEMQAKIDEERKALETKLDMEEE--ERNKARAELERREKDLLKAQQEHQSLLEKLSALEKK 504
            .:..:.:..|..|.:|..|..|:.:..  ...|...:.:||.|:..:....|.. .|::...:.:
  Fly   438 SEVSMSLVEKTQELKKTEENLLNTKGTLLLTKKVLTKTKRRYKEKKELVASHMK-TEQVLTTQAQ 501

Mouse   505 VIVGGVDLLAKAEEQEKLLEESNMELEER-RRRAEQLRKELEE-------------------KEQ 549
            .|:...||......|.....|...||:|: ||..:|.:..:::                   |||
  Fly   502 EILAAADLATDDTHQLHGTIERRRELDEKIRRSCDQFKDRMQDNLEMIGGSLNLYQDQQAALKEQ 566

Mouse   550 ERLD-IEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADL------------QQEHQREIEGLL 601
            ...: :...|.| |..|...:|.::.:..|...:..:..:|            .|..|..:..|:
  Fly   567 LSQEMVNSSYVS-QRLALNSSKSIEMLKEMCAQSLQDQTNLHNKLIGEVMKISDQHSQAFVAKLM 630

Mouse   602 ENIRQ----LSRELRLQMLIIDNFIPQDYQEMIENYVHWNEDIGEWQLKCVAYTGNNMRKQ---- 658
            |.::|    :|:|::..:.:|:. ..|.::.|:::.......|.:..|:.|......|.|:    
  Fly   631 EQMQQQQLLMSKEIQTNLQVIEE-NNQRHKAMLDSMQEKFATIIDSSLQSVEEHAKQMHKKLEQL 694

Mouse   659 --TPVPDKKERDPFEVDLSHV-YLAYTEESLRQS-LMKLERPRTSKGK 702
              ..:||.:|....:.:|::. .||..|::|.:| :|::|:.:..:.|
  Fly   695 GAMSLPDAEELQNLQEELANERALAQQEDALLESMMMQMEQIKNLRSK 742

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3aXP_006532388.1 KISc_KIF3 13..345 CDD:276822 160/345 (46%)
SMC_N <340..717 CDD:308206 83/411 (20%)
SMC_prok_B <449..>615 CDD:274008 39/204 (19%)
Klp61FNP_476818.1 KISc_BimC_Eg5 17..365 CDD:276815 165/355 (46%)
Kinesin 25..356 CDD:278646 157/338 (46%)
Microtub_bind 923..>1009 CDD:290642
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4221
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

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