DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3a and Klp61F

DIOPT Version :10

Sequence 1:XP_006532388.1 Gene:Kif3a / 16568 MGIID:107689 Length:725 Species:Mus musculus
Sequence 2:NP_476818.1 Gene:Klp61F / 38135 FlyBaseID:FBgn0004378 Length:1066 Species:Drosophila melanogaster


Alignment Length:763 Identity:244/763 - (31%)
Similarity:392/763 - (51%) Gaps:91/763 - (11%)


- Green bases have known domain annotations that are detailed below.


Mouse     4 NKSEKPE--SCDNVKVVVRCRPLNEREKSMCYRQAVSVDEM--RGTITVHKTDSSNEPPKTFTFD 64
            |.|.:|:  |..|::|.||.||||.||:  |.|.|..||.:  |..:|.|..||  :..|.||||
  Fly     7 NTSRQPQKKSNQNIQVYVRVRPLNSRER--CIRSAEVVDVVGPREVVTRHTLDS--KLTKKFTFD 67

Mouse    65 TVFGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTMEGVRAVPGLR--------- 120
            ..|||||||.|||::...|:|:.||.|||.|:|||||||||||.||.| .....|:         
  Fly    68 RSFGPESKQCDVYSVVVSPLIEEVLNGYNCTVFAYGQTGTGKTHTMVG-NETAELKSSWEDDSDI 131

Mouse   121 GVIPNSFAHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRLEV--KERPDVGVYIKD 183
            |:||.:.:|:|..:...|  ..:.:|:||||:||||:.|||..|.|.::.:  .......|.|:.
  Fly   132 GIIPRALSHLFDELRMME--VEYTMRISYLELYNEELCDLLSTDDTTKIRIFDDSTKKGSVIIQG 194

Mouse   184 LSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHL 248
            |....|::.||:.:::..|.:.|....|.||..|||||.:|:|.:...|.|::|...:::|||:|
  Fly   195 LEEIPVHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGIEGEDMLKIGKLNL 259

Mouse   249 VDLAGSERQAKTG-ATGQRLKEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGG 312
            |||||||..:|.| ..|.|::|...||.||.|||.||:|||| ::.|||||.||||||||:||||
  Fly   260 VDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVD-RAPHVPYRESKLTRLLQESLGG 323

Mouse   313 NSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINED-PKDALLRQFQKEIEELKKKLEE 376
            .:||.:.|.|.|...:.:||:|||.||:|||||:||..:|:. .|..:|:::.:||::||:.|..
  Fly   324 RTKTSIIATISPGHKDIEETLSTLEYAHRAKNIQNKPEVNQKLTKKTVLKEYTEEIDKLKRDLMA 388

Mouse   377 GEEVSGSDISGSEEDDEEGELGEDGEKKKKRRGSSSSSSSDSTCSVIEKPLDEFLPHQAGKKKVS 441
            ..:.:|..::    ::..||:....|.:.:.....         .::.|.|.:.|.:   |:|:.
  Fly   389 ARDKNGIYLA----EETYGEITLKLESQNRELNEK---------MLLLKALKDELQN---KEKIF 437

Mouse   442 PDKMVEMQAKIDEERKALETKLDMEEE--ERNKARAELERREKDLLKAQQEHQSLLEKLSALEKK 504
            .:..:.:..|..|.:|..|..|:.:..  ...|...:.:||.|:..:....|.. .|::...:.:
  Fly   438 SEVSMSLVEKTQELKKTEENLLNTKGTLLLTKKVLTKTKRRYKEKKELVASHMK-TEQVLTTQAQ 501

Mouse   505 VIVGGVDLLAKAEEQEKLLEESNMELEER-RRRAEQLRKELEE-------------------KEQ 549
            .|:...||......|.....|...||:|: ||..:|.:..:::                   |||
  Fly   502 EILAAADLATDDTHQLHGTIERRRELDEKIRRSCDQFKDRMQDNLEMIGGSLNLYQDQQAALKEQ 566

Mouse   550 ERLD-IEEKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADL------------QQEHQREIEGLL 601
            ...: :...|.| |..|...:|.::.:..|...:..:..:|            .|..|..:..|:
  Fly   567 LSQEMVNSSYVS-QRLALNSSKSIEMLKEMCAQSLQDQTNLHNKLIGEVMKISDQHSQAFVAKLM 630

Mouse   602 ENIRQ----LSRELRLQMLIIDNFIPQDYQEMIENYVHWNEDIGEWQLKCVAYTGNNMRKQ---- 658
            |.::|    :|:|::..:.:|:. ..|.::.|:::.......|.:..|:.|......|.|:    
  Fly   631 EQMQQQQLLMSKEIQTNLQVIEE-NNQRHKAMLDSMQEKFATIIDSSLQSVEEHAKQMHKKLEQL 694

Mouse   659 --TPVPDKKERDPFEVDLSHV-YLAYTEESLRQS-LMKLERPRTSKGK 702
              ..:||.:|....:.:|::. .||..|::|.:| :|::|:.:..:.|
  Fly   695 GAMSLPDAEELQNLQEELANERALAQQEDALLESMMMQMEQIKNLRSK 742

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3aXP_006532388.1 KISc_KIF3 13..345 CDD:276822 160/345 (46%)
Smc <450..>614 CDD:440809 39/202 (19%)
Klp61FNP_476818.1 KISc_BimC_Eg5 17..365 CDD:276815 165/355 (46%)
SMC_prok_B <408..728 CDD:274008 61/334 (18%)
SMC_prok_B <651..>921 CDD:274008 20/93 (22%)
Microtub_bind 923..>1004 CDD:464048
Blue background indicates that the domain is not in the aligned region.

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