DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3a and Ggamma1

DIOPT Version :10

Sequence 1:XP_006532388.1 Gene:Kif3a / 16568 MGIID:107689 Length:725 Species:Mus musculus
Sequence 2:NP_523662.1 Gene:Ggamma1 / 35881 FlyBaseID:FBgn0004921 Length:70 Species:Drosophila melanogaster


Alignment Length:52 Identity:11/52 - (21%)
Similarity:26/52 - (50%) Gaps:17/52 - (32%)


- Green bases have known domain annotations that are detailed below.


Mouse   510 VDLLAKAEEQEKLLEESNMELEERRRRA-----------EQLRKELEEKEQE 550
            :|:::.:.:|::::      :|:.||.|           .::.|.:.|.|||
  Fly     1 MDVMSSSLQQQRVV------VEQLRREAAIDRQTISESCAKMMKYITEHEQE 46

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3aXP_006532388.1 KISc_KIF3 13..345 CDD:276822
Smc <450..>614 CDD:440809 11/52 (21%)
Ggamma1NP_523662.1 GGL 8..65 CDD:238024 10/45 (22%)
Blue background indicates that the domain is not in the aligned region.

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