DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3a and Klp31E

DIOPT Version :10

Sequence 1:XP_006532388.1 Gene:Kif3a / 16568 MGIID:107689 Length:725 Species:Mus musculus
Sequence 2:NP_609398.2 Gene:Klp31E / 34422 FlyBaseID:FBgn0032243 Length:1048 Species:Drosophila melanogaster


Alignment Length:684 Identity:219/684 - (32%)
Similarity:338/684 - (49%) Gaps:108/684 - (15%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 INKSEKPESCDNVKVVVRCRPLNEREK-SMCYRQAVSVDEMRGTITVHKTDSSNEPPKTFTFDTV 66
            |||.      .:|:|.||.||.|.||. .||        .:..|:|:.:........|.||||.|
  Fly     8 INKD------SSVRVAVRIRPQNSRELIDMC--------RICTTVTLGEPQIFLGSDKAFTFDYV 58

Mouse    67 FGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTM------EGVRAVPGLRGVIPN 125
            |...|.|.|:|:.....::||.|.|||.|:.||||||:|||:||      |...:.....|:||.
  Fly    59 FDTNSNQCDIYSDCVEKLVDSTLHGYNATVLAYGQTGSGKTYTMGTGFDHESESSDSVQLGIIPR 123

Mouse   126 SFAHIFGHIAKAEGDT-----------RFLVRVSYLEIYNEEVRDLLGK-DQTQRLEVKERPDVG 178
            :..|||..|.:.||.:           :|.:.|.|:|:|||::.|||.. ::....::.|.....
  Fly   124 AVRHIFSGIEQLEGSSTSEHPAAGGSPQFSLAVQYIELYNEDIFDLLDPFNKNSNFKIHEDASGQ 188

Mouse   179 VYIKDLSAYVVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIE------CSEKGVDG 237
            :.|...|...:....|..:.:..|...|:..:|.||:.||||||:|||.:.      .|:...|.
  Fly   189 ITISGASIKPIYQPHDALKYLQQGALARTTASTKMNDQSSRSHALFTIFVRRQRLLTPSDNVPDN 253

Mouse   238 NMHVRMGKLHLVDLAGSERQAKTGATGQRLKEATKINLSLSTLGNVISALVD--GKSTHVPYRNS 300
            ::.....|.|.||||||||..:|.|||:|.:|...||..|..|||.||||.|  .::.|||||:|
  Fly   254 DLETLTSKFHFVDLAGSERLKRTQATGERAREGISINCGLLALGNCISALGDKSKRALHVPYRDS 318

Mouse   301 KLTRLLQDSLGGNSKTMMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQK 365
            ||||||||||||||:|:|.|.:.|:|.::.||::||:|||||:|||||.:||:|.....:.|.::
  Fly   319 KLTRLLQDSLGGNSQTLMIACVSPSDRDFMETLNTLKYANRARNIKNKVKINQDQSSRTISQLRR 383

Mouse   366 EIEELKKKL---EEGEEVSGSDISG----SEEDDEEGELGEDGEKKKKRRGSSSS---------- 413
            ||..|:.:|   ::|:.:  .|..|    |:..:|...|..:.::.::|..|..|          
  Fly   384 EIAALQLELLEYKQGKLI--VDCEGNTTISDTFNENKLLLSEIKRLQQRLKSLQSTIATLTQRNA 446

Mouse   414 -----------SSSDSTCSVIEKPLDEFLPHQAGKKKVSPDKMVEMQAKI---DEERKALETKLD 464
                       :|.|::...|.|.:.:::.           ::.|:|.|:   :|.||.:|.|  
  Fly   447 DLKTNLDLNKWTSDDNSDVEIAKVVGQYML-----------EIEELQTKLIESEEHRKQMEIK-- 498

Mouse   465 MEEEERN-----------KARAELERREKDLLKAQQEHQSLLEKLSALEKKVIVGGVDLLAKAEE 518
            .....||           ||:.:|| ||::||.::.......:.:|:.|.:|....    ::|||
  Fly   499 ATTSPRNAKPVYDSDIITKAKKDLE-RERELLMSRSLPGIQNQNVSSEETEVASSD----SEAEE 558

Mouse   519 QEKLLEESNMELEERRRRAEQLRKELEEKEQERLDIEEK----YTSLQEEAQGKTKKLKKVWTML 579
            ..|.||..:.::|.|.:..|||.......||.|...|||    |..::...:.:...|..:.|.:
  Fly   559 VVKDLEAIDNDIEMRTKLIEQLELTNSRYEQMRTHYEEKLSVLYCKIENTQKERDDVLANMTTSV 623

Mouse   580 MA-AKSEMADLQQEHQREIEGLLENIRQLSRELR 612
            .. :|..:..::.:::.:|..:...||:|....|
  Fly   624 STPSKDSLKKVKTDYESKISHMQTEIRKLQNAQR 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3aXP_006532388.1 KISc_KIF3 13..345 CDD:276822 143/358 (40%)
Smc <450..>614 CDD:440809 45/182 (25%)
Klp31ENP_609398.2 KISc_KIF4 12..364 CDD:276823 144/359 (40%)
Mplasa_alph_rch <372..>748 CDD:275316 66/306 (22%)
SMC_prok_B 622..>899 CDD:274008 6/36 (17%)
Rcc_KIF21 798..870 CDD:410202
Blue background indicates that the domain is not in the aligned region.

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