DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif3a and Klp3A

DIOPT Version :10

Sequence 1:XP_006532388.1 Gene:Kif3a / 16568 MGIID:107689 Length:725 Species:Mus musculus
Sequence 2:NP_525053.1 Gene:Klp3A / 31240 FlyBaseID:FBgn0011606 Length:1212 Species:Drosophila melanogaster


Alignment Length:775 Identity:245/775 - (31%)
Similarity:369/775 - (47%) Gaps:113/775 - (14%)


- Green bases have known domain annotations that are detailed below.


Mouse     6 SEKPESCDNVKVVVRCRPLNEREKSMCYRQAV--SVDEMRGT--ITVHKTDSSNEPPKTFTFDTV 66
            ||.| ||  |.|.:|.|||.:.|.....|.||  |.|   |.  :||::.:|       :|::.|
  Fly     3 SEDP-SC--VAVALRVRPLVQSELDRGCRIAVERSAD---GAPQVTVNRNES-------YTYNYV 54

Mouse    67 FGPESKQLDVYNLTARPIIDSVLEGYNGTIFAYGQTGTGKTFTM----EGVRAVPGLRGVIPNSF 127
            |..:..|.|::....:..:..:|.|||.||.||||||:|||:||    .||  :....||||.:.
  Fly    55 FDIDDSQKDLFETCVQAKVKKLLNGYNVTILAYGQTGSGKTYTMGTAFNGV--LDDHVGVIPRAV 117

Mouse   128 AHIFGHIAKAEGDTRFLVRVSYLEIYNEEVRDLLGKDQTQRL-----EVKERPDVGVYIKDLSAY 187
            ..||..||:.:.:.||.|..|::|:|.|:..||.......:.     |||.|    :.:..|:..
  Fly   118 HDIFTAIAEMQSEFRFAVTCSFVELYQEQFYDLFSSKTRDKATVDIREVKNR----IIMPGLTEL 178

Mouse   188 VVNNADDMDRIMTLGHKNRSVGATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLA 252
            ||.:|..:...:..|...|:|.||.|||.|||||||||:|:..::  :||...|...:.:|||||
  Fly   179 VVTSAQQVTDHLIRGSAGRAVAATAMNETSSRSHAIFTLTLVATK--LDGKQSVTTSRFNLVDLA 241

Mouse   253 GSERQAKTGATGQRLKEATKINLSLSTLGNVISALVDGKST-HVPYRNSKLTRLLQDSLGGNSKT 316
            ||||.:||.|:|.|.||...||..|..|||||:||..|::. ::|||.|||||||||||||||.|
  Fly   242 GSERCSKTLASGDRFKEGVNINKGLLALGNVINALGSGQAAGYIPYRQSKLTRLLQDSLGGNSIT 306

Mouse   317 MMCANIGPADYNYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKKKLEEGEEVS 381
            :|.|.:.|||||..||:||||||:||..||||..:|.||..|.:...:..|::|:.:|..|.::|
  Fly   307 LMIACVSPADYNVAETLSTLRYADRALQIKNKPVVNLDPHAAEVNMLKDVIQKLRVELLSGGKMS 371

Mouse   382 GSDIS--GSE-------EDDEEGELGEDGEKKK---------KRRGSSSSSSSDSTCSVIEKPLD 428
            .|.||  |:.       |:...|.:....|.::         .|..........|...:.||.:.
  Fly   372 SSLISAVGAAGLGAIPCEESLAGSMANAAEIQRLKEQVRTLQDRNRKLQQELHQSLLDLTEKEMR 436

Mouse   429 EFLPHQAGKKKVSPDKMVEMQAKIDEERKAL----ETKLDMEEEE----RNKARAELERREKDLL 485
            ..:..||..|..|  .:.|::.|:|:..:|.    .|..|.|..:    .|:...||:|.:::|.
  Fly   437 AHIAEQAHDKLRS--HVSELKNKLDQREQAQFGNENTNGDNEMRDFSLLVNRVHVELQRTQEELE 499

Mouse   486 KAQQEHQSLLEKLSALEKKVIVGG------VDLLAKAEEQEKLLEESNMELEERR-RRAEQLRKE 543
            ....|.:..|...|..|     ||      |..:..:..:|...::.|...|.|. .|...|::|
  Fly   500 SQGHESRQRLSSRSHTE-----GGESGGDEVHEMLHSHSEEYTNKQMNFAGELRNINRQLDLKQE 559

Mouse   544 LEE---KEQERLDIE----------EKYTSLQEEAQGKTKKLKKVWTMLMAAKSEMADLQQEHQR 595
            |.|   :...|||.:          :|...|:.|.:....:|:.:     .:|...|.|.:|.::
  Fly   560 LHERIMRNFSRLDSDDEDVKLRLCNQKIDDLEAERRDLMDQLRNI-----KSKDISAKLAEERRK 619

Mouse   596 EIEGLLENIRQLSRELRLQMLIIDNFIPQDYQEMIENYVHWNEDIGEWQLKCV-AYTGNN----- 654
            .::.|.:.|..|.|:|..|..::.  |....:|.|:|.......:.|.::|.: |..|.:     
  Fly   620 RLQLLEQEISDLRRKLITQANLLK--IRDKEREKIQNLSTEIRTMKESKVKLIRAMRGESEKFRQ 682

Mouse   655 --MRKQTPVPDKKERDPFEVDLSHVYLAYTEESLRQSLMKLERPRTSKGKARPKMGRRKR 712
              |.::..:...|.:|          .....|.:||..:..::.:..|.|....:...||
  Fly   683 WKMVREKELTQLKSKD----------RKMQSEIVRQQTLHSKQRQVLKRKCEEALAANKR 732

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif3aXP_006532388.1 KISc_KIF3 13..345 CDD:276822 149/345 (43%)
Smc <450..>614 CDD:440809 43/191 (23%)
Klp3ANP_525053.1 KISc_KIF4 7..336 CDD:276823 151/348 (43%)
Smc <453..>985 CDD:440809 63/302 (21%)
Metallothio <1071..1115 CDD:395080
Blue background indicates that the domain is not in the aligned region.

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