DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kif13b and cmet

DIOPT Version :9

Sequence 1:XP_006518682.1 Gene:Kif13b / 16554 MGIID:1098265 Length:1847 Species:Mus musculus
Sequence 2:NP_524993.3 Gene:cmet / 53561 FlyBaseID:FBgn0040232 Length:2189 Species:Drosophila melanogaster


Alignment Length:1642 Identity:373/1642 - (22%)
Similarity:642/1642 - (39%) Gaps:403/1642 - (24%)


- Green bases have known domain annotations that are detailed below.


Mouse     4 SKVKVAVRVRP-----------MNRREIDLHTKCVVDVEANKVILNPVNTNLSKGDARGQPKIFA 57
            |.::|.::|||           ..||.|.|                        .|:..:|.:|.
  Fly     7 SSIQVCIKVRPCEPGLTSLWQVKERRSIHL------------------------ADSHAEPYVFD 47

Mouse    58 YDHCFWSMDESVREKYAGQEDVFKCLGENILQNAFDGYNACIFAYGQTGSGKSYTMMGTADQPGL 122
            |          |.::.|..::||..:.::|:.....|:|..|||||||.|||:|||||....||:
  Fly    48 Y----------VFDEGASNQEVFDRMAKHIVHACMQGFNGTIFAYGQTSSGKTYTMMGDEQNPGV 102

Mouse   123 IPRLCSGLFERTQKEENEEQSFKVEVSYMEIYNEKVRDLLDPKGSRQTLKVREHSVLGPYVDGL- 186
            :......:|::...|  .|:.|.:.|.|:||||||:.|||:.|  .|.||:.|..      :|: 
  Fly   103 MVLAAKEIFQQISSE--TERDFLLRVGYIEIYNEKIYDLLNKK--NQDLKIHESG------NGIV 157

Mouse   187 ----SKLAVTSYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFKITLTHTLYDVKSGTSGEKV- 246
                .:..:||..|:..|:..|||.|||..|||||.||||||:|||.:...    ||..|.:.. 
  Fly   158 NVNCEECIITSEVDLLRLLCLGNKERTVGETNMNERSSRSHAIFKIIIESR----KSDHSDDDAV 218

Mouse   247 --GKLSLVDLAGSERATKTGAAGDRLKEGSNINKSLTTLGLVISALADQGAGKNKNKFVPYRDSV 309
              ..|:||||||||||.:|||.|.|||||.:|||||..|..||.:|::..    .|:|..||||.
  Fly   219 IQSVLNLVDLAGSERADQTGARGARLKEGGHINKSLLFLSNVIKSLSENA----DNRFTNYRDSK 279

Mouse   310 LTWLLKDSLGGNSKTAMVATVSPAADNYDETLSTLRYADRAKHIVNHAVVNE-DPNARIIRDLRE 373
            ||.:|:.|||||:.|:::.|:.|:.  .:|:.|||.:|.|||.|.....||| ..:|.:::.|..
  Fly   280 LTRILQASLGGNAFTSIICTIKPSI--MEESQSTLSFATRAKKIRIKPQVNEMVSDATMMKRLER 342

Mouse   374 EVEKLREQLTKAEAMKSPELKDRLEESEKLIQ----------EMTVTWEEKLRKT---------E 419
            |::.|:::|  ||..:..|.:.::|..|:.|:          .::...::|.|:|         .
  Fly   343 EIKVLKDKL--AEEERKNENQQKVEHLERQIKHDMHKIICGHSLSDKGQQKRRRTWCPTASGSHL 405

Mouse   420 EIA-----QERQKQLESLG-----ISLQTSGIKVGDDKC-----FLVNLNADPALNELLVYYLKE 469
            |:|     ::|..|...:.     :...||......|..     .|.:|:.....|.:...:|..
  Fly   406 ELAETGTTEDRIDQFPKVSHLPKPVFFHTSNAGKRWDNIPKTINILGSLDIGTESNSISEEFLPA 470

Mouse   470 HTLIGSANSQDI--QLCGMGILPEHGIIDITPEGQVVLTPQKNTRTFVNGSSVSSPIQLHHGDRI 532
            ..:...:...|:  .:..:..||:   :.:||:|.  ||..| .:..:....:.:.::.|     
  Fly   471 ECIDFGSPRPDVLKPMLTIRQLPD---LPLTPKGP--LTTDK-IKKEIQDLQMFTSLEKH----- 524

Mouse   533 LWGNNHFFRLNLPK----KKKKAE----REDEDREA--------SLKNDSSSEQLDADGDSSSEV 581
                   |.:...:    |:|.||    |::.::|:        :|:.:.:|  |.||.::::..
  Fly   525 -------FEVECEEVQGLKEKLAEVTAQRDNLEQESLAEKERYDALEKEVTS--LRADNEAANSK 580

Mouse   582 SSEINFNFEYAQMEVTMKALGSNDPMQSILSSLEQQHEEEKRSALERQRLMYEHELEQLRRRLSP 646
            .||:  ..:.:.::.||:.:   :....:...||.:.|..|:|:    :|..:..|..|..:.|.
  Fly   581 ISEL--EEKLSTLKQTMRIM---EVENQVAVGLEFEFEAHKKSS----KLRVDDLLSALLEKEST 636

Mouse   647 ERQNCRGVDRLS--FHSPSAQQRLKQWAEEREATLNNSLMRLREQIVK--ANLLVREASYIAEEL 707
            .....:.:|.|:  ....|.:..:...|.|:|....:|:....|::.|  |:|..::.|...::|
  Fly   637 IESLQKSLDNLTRDVLRNSKEGHMLSIAPEQEDIAGDSICNKCEELEKLIADLESKKNSCECDQL 701

Mouse   708 DKRTEYKVTLQIPTSSLD-ANRKRGSLLSEPAIQVRRKGKGKQIWSLEKLENRLLDMRDLY---- 767
              |.|. |:::....|:: |.....|.:.:.|....|..|     .|...:|....:::.|    
  Fly   702 --RLEI-VSVRDKLESVESAFNLASSEIIQKATDCERLSK-----ELSTSQNAFGQLQERYDALD 758

Mouse   768 QEWKE--------CEEDSPVSRSYFKRADPFYDEQENHSLIGVANVFLETLFYDVKLQYAVPIIN 824
            |:|:.        .|:...|...|.|..:. |::.|:.:....:..|......:.|.|..:..:|
  Fly   759 QQWQAQQAGITTLHEKHEHVQEKYQKLQEE-YEQLESRARSASSAEFQRLQNDNTKFQADIASLN 822

Mouse   825 QKGEVAGRLHVEVMRLSGAIGERIAGGDDPTEVSSEK-EAQENRLVCMVKILQATGLPQHLCHFV 888
            ::.|.|..:..||..               :|.:.|| ..|.:.|...:|.|: |...:     :
  Fly   823 ERLEEAQNMLTEVQN---------------SESTVEKLRIQNHELTAKIKELE-TNFEE-----M 866

Mouse   889 FCKYDFWDQQEPVTV----APEVDTSSSPTSKQPQCMVVFDHCSEF-----SVNITEDFIEYLSE 944
            ..:||....|...:|    |...:....|||...:.|......|:|     .:|:...|:: |||
  Fly   867 QREYDCLSNQLMESVQENDALREEIKQRPTSHVEESMRSSGISSDFDEQKQDINLLHQFVQ-LSE 930

Mouse   945 GALAIEVYGHKMNDPRKNPALWDLGIIQA-KTRSLRDRWSEVTRK--LEFWVQILEQNENGDYCP 1006
            ....||:..|.             ||.:. :...::...||...|  ||....|.|.|...|  .
  Fly   931 SVQQIELQHHS-------------GISRLFRANQMKLDQSEPGLKLCLESAEYIEEDNRQSD--A 980

Mouse  1007 VEVIAAKDVPTGGIFQLRQ--------GQSRRV-----QVEVKSVQESGTLPLMEECILSVGIGC 1058
            .|.|..|.......||:::        |:.:|:     |:|.:..::|..:...|          
  Fly   981 TEPICLKGFLKRHRFQIKRLSQEHVDMGEEKRLLDIISQLEQEIEEKSALMEATE---------- 1035

Mouse  1059 VKVRPLRSPKIHENVHEEEEDMDSYQDRDLERLRRKWLNALTKRQ---EYLDQQLQKLVSKHDKT 1120
                        ..::|..|.|.:.:...||  :...:|.:...|   |.|::|..::...:::.
  Fly  1036 ------------ATINEMREQMTNLESALLE--KSVIINKVEDYQRQIESLEKQNAEMTMVYEEL 1086

Mouse  1121 EDDADREAQLLEMRLTLTEERNAVMVPSAGSGIPGAPAEWTPVPG-------------------- 1165
            :|...||:.:.|         :.:.||.....:||.|..    |.                    
  Fly  1087 QDRVTRESSMSE---------SLLRVPPDEDTLPGCPTS----PSRREQEVATLKTSITELQSQV 1138

Mouse  1166 ------METHIPVIFL---------------------------DLNADDFSSQDNLD-------- 1189
                  :|.|:..|.|                           :|:.|....|:.||        
  Fly  1139 SDLKAELENHLRQIQLKDGNIARLQTDFEEMSERCLSMEVRLAELDEDTKQKQELLDRQAQKLSD 1203

Mouse  1190 -----DPEAGWDATLTGEEEEEFFELQIVKQHDGEVKAEASWDSAVHSCPQLSKGTPADERVFLI 1249
                 |.....:|.|..:..:....|.:......::...:.:||.:....||...  |.:.:..:
  Fly  1204 DLCLIDQLQKKNAQLVEQYHKATESLSLADAKPDQILLSSQYDSQIEKLNQLLNA--AKDELHDV 1266

Mouse  1250 LRVTVQLSHPADMQLVLRKRICVHVHGRQGFAQSLLKKMSHRSSIPGCGVTFEIVSNIPEDAQGV 1314
            .|:.........|:.:|:.......:..:.:|:....|..:.|:          |:.:.|....|
  Fly  1267 RRIKDDEISALRMEFLLQIETNEKENQAKFYAELQETKDRYESN----------VAELKEKLLQV 1321

Mouse  1315 EEREALARMAANVENPASADSEAYIEKYLRSVLAVENLLTLDRLRQEVAVKEQLTGKGKLSRRSI 1379
            |  |.|:.:....:....|...|:.|...::|....||:...:...| .::|.|  |.||:..|.
  Fly  1322 E--ETLSSVTVRCQAELEALKSAHKENISQAVEERNNLIVQHQAEME-TIRETL--KNKLAEAST 1381

Mouse  1380 SSPSMNRLSGSRQELSPSHSLGSNKGRWESQQDVSQTLVSRGIAPGPPALSVSPQNNQSPDPGLG 1444
            ....|.  ...|.|:        |:.|....:.::||...|                   |.|  
  Fly  1382 QQSKME--DAFRAEI--------NEVRATLMEQLNQTKEDR-------------------DKG-- 1415

Mouse  1445 GVAASYLNPVKSLVPQM 1461
               ||.|..||..:.||
  Fly  1416 ---ASKLEEVKKTLEQM 1429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif13bXP_006518682.1 KISc_KIF1A_KIF1B 4..360 CDD:276816 140/374 (37%)
Kinesin_assoc 357..469 CDD:374417 28/146 (19%)
FHA 447..544 CDD:238017 15/103 (15%)
DUF3584 <544..>772 CDD:378817 51/252 (20%)
KIF1B 756..802 CDD:372100 10/57 (18%)
C2 <888..>952 CDD:387358 18/72 (25%)
DUF3585 <1073..1143 CDD:390065 14/72 (19%)
DUF3694 <1220..1278 CDD:372133 8/57 (14%)
PHA03247 <1423..1659 CDD:223021 9/39 (23%)
CAP_GLY 1724..1787 CDD:366568
cmetNP_524993.3 KISc 8..328 CDD:214526 139/373 (37%)
Motor_domain 8..321 CDD:277568 138/366 (38%)
Smc <680..1449 CDD:224117 163/884 (18%)
TMPIT 779..>867 CDD:285135 20/109 (18%)
Smc 1042..1910 CDD:224117 79/454 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2883
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.