DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kif13a and Khc-73

DIOPT Version :10

Sequence 1:XP_036013758.1 Gene:Kif13a / 16553 MGIID:1098264 Length:1840 Species:Mus musculus
Sequence 2:NP_001261000.1 Gene:Khc-73 / 36718 FlyBaseID:FBgn0019968 Length:1957 Species:Drosophila melanogaster


Alignment Length:1846 Identity:917/1846 - (49%)
Similarity:1156/1846 - (62%) Gaps:233/1846 - (12%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MSDTKVKVAVRVRPMNRRELELNTKCVVEMEGNQTVLHPPPSNTKQGERKPPKVFAFDYCFWSMD 65
            |:..|:||||||||.||||:||:|||:||||..||:|..||...|. |||.||.||||:||:|::
  Fly     1 MASDKIKVAVRVRPFNRREIELDTKCIVEMEKQQTILQNPPPLEKI-ERKQPKTFAFDHCFYSLN 64

Mouse    66 ESNTTKYAGQEVVFKCLGEGILEKAFQGYNACIFAYGQTGSGKSFSMMGHAEQLGLIPRLCCALF 130
            ..: ..:|.||.||.|:|.|||:.||||||||||||||||||||::|||..|..|:|||||..||
  Fly    65 PED-ENFASQETVFDCVGRGILDNAFQGYNACIFAYGQTGSGKSYTMMGTQESKGIIPRLCDQLF 128

Mouse   131 QRIALEQNESQTFKVEVSYMEIYNEKVRDLLDPKGSRQSLKVREHKVLGPYVDGLSQLAVTSFED 195
            ..||.:......:||||||||||||||.||||||.::||||||||.|:||||||||||||||::|
  Fly   129 SAIANKSTPELMYKVEVSYMEIYNEKVHDLLDPKPNKQSLKVREHNVMGPYVDGLSQLAVTSYQD 193

Mouse   196 IESLMSEGNKSRTVAATNMNEESSRSHAVFNIIITQTLYDLQSGNSGEKVSKVSLVDLAGSERVS 260
            |::||:||||||||||||||.|||||||||::::||.|.|..:|.||||||::||||||||||..
  Fly   194 IDNLMTEGNKSRTVAATNMNAESSRSHAVFSVVLTQILTDQATGVSGEKVSRMSLVDLAGSERAV 258

Mouse   261 KTGAAGERLKEGSNINKSLTTLGLVISSLADQAAGK--GKNKFVPYRDSVLTWLLKDNLGGNSQT 323
            ||||.|:||||||||||||||||||||.||||:.||  |.:||||||||||||||||||||||:|
  Fly   259 KTGAVGDRLKEGSNINKSLTTLGLVISKLADQSNGKKSGNDKFVPYRDSVLTWLLKDNLGGNSRT 323

Mouse   324 SMIATISPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNAKVIRELREEVEKLREQLSQAEAMK 388
            .|:|||||:||||||||||||||||||||||||||||||||::|||||.|||.||..|..|....
  Fly   324 VMVATISPSADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELRHEVETLRSMLKHATGSP 388

Mouse   389 APELKEKLEESEKLIKELTVTWEEKLRKTEAIAQERQRQLESMGISLETSGIKVGDDKCYLVNLN 453
            ..::::||.|||.|:|:::.||||||.|||.|..|||:.||.||||::.|||||..:|.||||||
  Fly   389 VGDVQDKLAESENLMKQISQTWEEKLVKTERIQNERQQALEKMGISVQASGIKVEKNKYYLVNLN 453

Mouse   454 ADPALNELLVYYLKDHTRVGADT----SQDIQLFGIGIQPEHCEIDIAADGDITLTPKENARSCV 514
            |||:|||||||||||.|.:|..|    ..||||.|:|||||||.|.| .|..:.:.|.:.||..|
  Fly   454 ADPSLNELLVYYLKDRTLIGGRTISGQQPDIQLSGLGIQPEHCVITI-EDSGLYMEPVQGARCFV 517

Mouse   515 NGTLVCSTTQLWHGDRILWGNNHFFRINLPKRKRRDWLKDFERETSSAEHDLDAASEASSEP--- 576
            ||:.....|.|.:||||||||:||||:|.||...                    .|..:|||   
  Fly   518 NGSAAVEKTPLQNGDRILWGNHHFFRVNSPKSNN--------------------TSMCASEPQTP 562

Mouse   577 ----DYNYEFAQMEVIMKTLNSNGGFPIVSLSAWWSSPWWSYLKILFPLLWFQTKLVHQHWERDP 637
                |||  ||:.|::...|::                                         ||
  Fly   563 AQLIDYN--FARDEIMQNELSN-----------------------------------------DP 584

Mouse   638 VQNVVQVLEKQYLEEKRTALEEQRLMYERELEQLRQQLSPER-QPPSSASD-----RLAYSSQTA 696
            :|..:..||:|:.|:|:.|||:||..|||:.:|||..|||.. ..|.:..|     ::..::.|:
  Fly   585 IQTAIARLERQHEEDKQVALEKQRQEYERQFQQLRNILSPSTPYAPYAPYDPLRMGKITPNTPTS 649

Mouse   697 QQKVTQWAEERDELFRQSLAKLREQLVKANTLVREANFLAEEMSKLTDYQVTLQIPAANLSANRK 761
            |.:|.:||:||||:||:||.:|:..:::||:||:|||||||||.|.|.:.||||||.||||.||:
  Fly   650 QMRVEKWAQERDEMFRRSLGQLKTDIMRANSLVQEANFLAEEMEKKTKFSVTLQIPPANLSPNRR 714

Mouse   762 RGAIVSEPAIQARRKGKGTQVWTIEKLENKLIDMRDLYQEWKENVPEAKRLYG------KRGDPF 820
            |||.||||||..:|...|:|:||:|||||||||||::|||.||.|     |.|      |..|||
  Fly   715 RGAFVSEPAILVKRTNSGSQIWTMEKLENKLIDMREMYQEHKERV-----LNGLDEDNAKPQDPF 774

Mouse   821 YEAQENHNLIGVANVFLECLFCDVKLQYAVPIISQQGEVAGRLHVEVTRITGTIP-ERMAEDDSS 884
            ||:|||||||||||:|||.||.||||.|..|||||||||||||.||:.||.|.:| :||.| ..|
  Fly   775 YESQENHNLIGVANIFLEVLFHDVKLDYHTPIISQQGEVAGRLQVEIERIAGQMPQDRMCE-SVS 838

Mouse   885 ENSSESGSL--EVVDSSGEVIHRVKKLTCRVIIKEATGLPISLSNFVFCQYTFWDQCESTVAAPV 947
            |:|.:|...  :.||.:.      .::||||.||.|:|||:|||||||||||||...|..|  ||
  Fly   839 ESSGDSRDEYDDPVDPTS------NQITCRVTIKCASGLPLSLSNFVFCQYTFWGHQEMVV--PV 895

Mouse   948 VDPDVPSPQSKDAQYTVTFSHCKDYVVTVTEEFLEFISDGALAIEVWGHRCAG-NGSPIWEVDSL 1011
            ::.:   ..:.|......|.|.:|:.||:.|||||...:|||:|||||||.|| :.:..|||:..
  Fly   896 INAE---STAHDQNMVFKFEHTQDFTVTINEEFLEHCIEGALSIEVWGHRSAGFSKTKGWEVEQQ 957

Mouse  1012 HAKTRTLHDRWNEVTRRIEVWISILELNELGDYAAVELHQAKDVNTGGVFQLRQGHSRRVQVTVK 1076
            .||.|:|.|||.|::|:||:|:.|.|||:.|:|:.||:....:|.|||::|||||..|||.|.||
  Fly   958 QAKARSLVDRWAELSRKIELWVEIHELNDNGEYSPVEVTNRNEVLTGGIYQLRQGQQRRVNVRVK 1022

Mouse  1077 PVQHSGTLPLMVEAILSVSIGCVTARSTKLQRGLDSYQRDEEDGGDMDSYQEEDLNCVRERWSDA 1141
            |||:|||||::.::|::|:||.||.|| :|||.|             ||||||||..:||:||:|
  Fly  1023 PVQNSGTLPIICQSIVNVAIGSVTVRS-RLQRPL-------------DSYQEEDLTVLREKWSEA 1073

Mouse  1142 LIKRREYLDEQIKKVSNKKEKTEDDMEREARLVEQWVGLTEERNAVLVPAPGSGIPGAPADWVPP 1206
            |.:||:|||:||:.:..|:||.|.:.|||..||.|||.||||||||||||||||||||||.|.||
  Fly  1074 LGRRRQYLDQQIQMLIKKEEKNEQERERELSLVHQWVSLTEERNAVLVPAPGSGIPGAPASWEPP 1138

Mouse  1207 PGMETHIPVLFLDLNADDLSA---NEQLVGPHASGVNSILPKEHGSQFFYLPIIKHSDDEVSATA 1268
            .|||.|:|||||:||.|||||   |::|   ..:|:||||.||||.:|:.|.|::|.|.:|...|
  Fly  1139 SGMEPHVPVLFLNLNGDDLSAQNTNDEL---SVAGINSILSKEHGHKFYTLQILQHLDKDVCCVA 1200

Mouse  1269 SWDSSVHDSLHLNRVTPQNERIYLIVKTTVQLSHPAAMELVLRKRIAANIYNKQSFTQSLK--RR 1331
            |||||:|||..|||||..|||:|||::|||:|||||.|:||||||::.||...|:.|..||  |.
  Fly  1201 SWDSSMHDSQALNRVTEANERVYLILRTTVRLSHPAPMDLVLRKRLSINIKKGQTLTDRLKKFRL 1265

Mouse  1332 ISLINICYSCGVTYEIVSNIPKATEEIEDRETLALLAARSENEGTLDGETYIEKYTRGVLQVENI 1396
            :...|..:..|||||:|||||||:||:||||:||.|||..::....|||||||||||||..||:|
  Fly  1266 VRGENAIWQSGVTYEVVSNIPKASEELEDRESLAQLAASGDDCSASDGETYIEKYTRGVSAVESI 1330

Mouse  1397 LSLERLRQAVTVKEALSTKAR--HIRRSLSTPNVHNVSSSRPDLSGFDEDDKGWPENQLDVSDYS 1459
            |:|:||||.|.|||..:...:  .:|:::|.||...:..       ||..    .|:.|:|. .|
  Fly  1331 LTLDRLRQNVAVKELETAHGQPLSMRKTVSVPNFSQIMR-------FDAS----MESLLNVG-RS 1383

Mouse  1460 SSYQDV--ACYG---TLPRDSP---------RRSKEGCPSENPHALTVSPFKAFSPQPPKFFKPL 1510
            .|:.|:  :..|   |....||         |.|..|..|.:.     ||.|||....|...|.|
  Fly  1384 ESFADLNNSALGNKFTPAGHSPAGAGGVIRSRHSFGGKGSSDD-----SPGKAFGIASPATSKLL 1443

Mouse  1511 MPVKEEHKKRLALEARPLLSQESMPPSQAHNPGCIVTPGSNGSSMPVEHSSKPEKKIDSEEEENE 1575
                  ..:...|...||....|:                  ...|.:..|..|...:.|:|..:
  Fly  1444 ------GMRMTTLHEEPLGGHRSL------------------DEEPEDSYSDSEYAAEYEQERQQ 1484

Mouse  1576 LEALSRKLMLTQPYVPVEFADFSVYNASLENREWSSSKADLTDSRALEKAVSRSPTTSSLTSGYF 1640
            .::::.:..||.......|.|.|.::........||:.|::.....| ..:|.|.:||   |||.
  Fly  1485 NKSMATRSRLTASKTMDSFMDVSSHSNQSYLSYTSSANANMKHLTGL-ATLSMSSSTS---SGYG 1545

Mouse  1641 SH--SASNATLSDMAVPSSDSSDQLAVSTKEVECAEPP------GPSLAPDVRPASNQELTE--- 1694
            |.  |.:|.:..|:|...|.|.|: ......|....||      .|.| .|:..|..||..|   
  Fly  1546 SQAVSCNNLSNEDIASMRSMSIDE-TPDFDRVNSNSPPNRQARVNPFL-KDMPKAKIQEQPEQQA 1608

Mouse  1695 -----------------VGRGSGKDETIAVPLEENSAL-----PKGTPSPQSIPEESSRMPCRTA 1737
                             ....|..||...:|...|:.|     ||...|...:.|..|:...:|.
  Fly  1609 KKLQEAFTHPLEQLESSQNAQSDDDECAQLPKNNNNNLDLVNEPKPLSSQTDLEESMSQPKSKTE 1673

Mouse  1738 SCSELDVG-PSKD--GHQAREFCPGE 1760
            ..::...| .|.|  .|.:.:...|:
  Fly  1674 FATDNQNGNRSSDELSHSSEDLLEGD 1699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kif13aXP_036013758.1 KISc_KIF1A_KIF1B 5..359 CDD:276816 261/355 (74%)
Kinesin_assoc 356..468 CDD:465047 71/111 (64%)
FHA_KIF13A 446..554 CDD:438781 62/111 (56%)
SMC_prok_B <646..>801 CDD:274008 87/160 (54%)
KIF1B 788..832 CDD:463574 30/49 (61%)
DUF3694 <1255..1319 CDD:463599 40/63 (63%)
Khc-73NP_001261000.1 KISc_KIF1A_KIF1B 4..359 CDD:276816 261/356 (73%)
Kinesin_assoc 356..468 CDD:465047 71/111 (64%)
FHA_KIF13 446..547 CDD:438758 60/101 (59%)
KIF1B 741..786 CDD:463574 30/49 (61%)
DUF3694 989..1243 CDD:463599 160/270 (59%)
CAP_GLY 1785..1850 CDD:460154
Blue background indicates that the domain is not in the aligned region.

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