DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DDX5 and Rm62

DIOPT Version :10

Sequence 1:NP_004387.1 Gene:DDX5 / 1655 HGNCID:2746 Length:614 Species:Homo sapiens
Sequence 2:NP_524243.2 Gene:Rm62 / 40739 FlyBaseID:FBgn0003261 Length:719 Species:Drosophila melanogaster


Alignment Length:556 Identity:316/556 - (56%)
Similarity:377/556 - (67%) Gaps:56/556 - (10%)


- Green bases have known domain annotations that are detailed below.


Human     3 GYSSDRDRGRDR--------GFGAPRFGGS---------RAGPL--------SGKKFGNPG---- 38
            |:|....||.||        |.|..||||.         |.|.:        .|.:||..|    
  Fly   153 GHSGRGGRGGDRGGDDRRGGGGGGNRFGGGGGGGDYHGIRNGRVEKRRDDRGGGNRFGGGGGFGD 217

Human    39 ---------EKLVKKKWNLDELPKFEKNFYQEHPDLARRTAQEVETYRRSKEITVRGHNCPKPVL 94
                     :.|..:..:...|..|:||||||||::|.|:..||:.||..:|||||| ..|.|:.
  Fly   218 RRGGGGGGSQDLPMRPVDFSNLAPFKKNFYQEHPNVANRSPYEVQRYREEQEITVRG-QVPNPIQ 281

Human    95 NFYEANFPANVMDVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQ 159
            :|.|.:.|..||..|.||.:..||||||||||:|:||.:.||:|:|||||||.|:||||||||:|
  Fly   282 DFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIVHINNQ 346

Human   160 PFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIAT 224
            ..|:||||||.||||||||||||:||||.|:..:..:::||::||||||.|:|||:||.||.|||
  Fly   347 QPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPKGGQMRDLQRGCEIVIAT 411

Human   225 PGRLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQL 289
            ||||||||..|.|||:|.||||||||||||||||||||||||.|||||||||||||||||||:||
  Fly   412 PGRLIDFLSAGSTNLKRCTYLVLDEADRMLDMGFEPQIRKIVSQIRPDRQTLMWSATWPKEVKQL 476

Human   290 AEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEI--MSEKENKTIVFVETKR 352
            |||||.:||.||||:|||||||||.|:||||.:..|:|||..|:.:|  .||...|.|:||||||
  Fly   477 AEDFLGNYIQINIGSLELSANHNIRQVVDVCDEFSKEEKLKTLLSDIYDTSESPGKIIIFVETKR 541

Human   353 RCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYD 417
            |.|.|.|.:|..|.....|||||||.|||:||.||:.||:.||:|||||:|||||:.:|:|||:|
  Fly   542 RVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSNILVATDVAARGLDVDGIKYVINFD 606

Human   418 YPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVE----DR 478
            ||.:|||||||||||.||...||::.|||.||.||...|:.|||||||.|||.|..|..    |.
  Fly   607 YPQNSEDYIHRIGRTGRSNTKGTSFAFFTKNNAKQAKALVDVLREANQEINPALENLARNSRYDG 671

Human   479 GSGRSR---GRGGMKDDRRDRYSAG--KRGGFNTFR 509
            |.||||   |.||      .|:..|  |:|..:..|
  Fly   672 GGGRSRYGGGGGG------GRFGGGGFKKGSLSNGR 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DDX5NP_004387.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..39 18/73 (25%)
DEAD-like_helicase_N 6..507 CDD:475120 313/549 (57%)
Q motif 94..122 12/27 (44%)
DEAD box 248..251 2/2 (100%)
Transactivation domain 477..614 14/38 (37%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 477..504 12/31 (39%)
P68HR 498..532 CDD:429808 4/14 (29%)
P68HR 551..583 CDD:429808
Rm62NP_524243.2 DEAD-like_helicase_N 231..669 CDD:475120 283/438 (65%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.