DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Napsa and CG6508

DIOPT Version :10

Sequence 1:NP_032463.1 Gene:Napsa / 16541 MGIID:109365 Length:419 Species:Mus musculus
Sequence 2:NP_609457.1 Gene:CG6508 / 34493 FlyBaseID:FBgn0032303 Length:423 Species:Drosophila melanogaster


Alignment Length:412 Identity:164/412 - (39%)
Similarity:227/412 - (55%) Gaps:38/412 - (9%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 PLLLLLLCLLLGNLEPEEAKLIRVPLQR------IHL---GHRILNPLNGWEQLAELSRTSTSGG 58
            ||.||||...:|.|.       |.|:.|      .|.   ..:||.....:....:.|:|:.   
  Fly    10 PLFLLLLDHSMGQLR-------RTPITRQINQNKTHANVKAEKILLAAKYFLVDRQSSQTTQ--- 64

Mouse    59 NPSFVPLSKFMNTQYFGTIGLGTPPQNFTVVFDTGSSNLWVPSTRCHFFSLACWFHHRFNPKASS 123
                 .|:...|.:|...:.:|||||.|.:.||||||:|||||.:|...:.||..|:::|..|||
  Fly    65 -----VLANGFNLEYTIRLCIGTPPQCFNLQFDTGSSDLWVPSVKCSSTNEACQKHNKYNSSASS 124

Mouse   124 SFRPNGTKFAIQYGTGRLSGILSQDNLTIGGIHDAFVTFGEALWEPSLIFALAHFDGILGLGFPT 188
            |...:|..|:||||:|.|||.||.|.:.|.|:.....||.||:.||...|....||||:|:.|.:
  Fly   125 SHVEDGKGFSIQYGSGSLSGFLSTDTVDIDGMVIRNQTFAEAIDEPGSAFVNTIFDGIIGMAFAS 189

Mouse   189 LAVGGVQPPLDAMVEQGLLEKPVFSFYLNRDSEGSDGGELVLGGSDPAHYVPPLTFIPVTIPAYW 253
            :: |||..|.|.::.|||::.||||.||.||.....|||::.||.|.:.|...:.::||::||||
  Fly   190 IS-GGVTTPFDNIIRQGLVKHPVFSVYLRRDGTSQSGGEVIWGGIDRSIYRGCINYVPVSMPAYW 253

Mouse   254 QVHMESVKVGTGLSLCAQGCSAILDTGTSLITGPSEEIRALNKAIGGYPFLNGQYFIQCSKTPTL 318
            |....|||: .|:.|| .||.||.|||||||..|....:|:||.:......:|:.|:.||....|
  Fly   254 QFTANSVKI-EGILLC-NGCQAIADTGTSLIAVPLRAYKAINKVLNATDAGDGEAFVDCSSLCRL 316

Mouse   319 PPVSFHLGGVWFNLTGQDYVIKILQSDVG--LCLLGFQALDIPKPAGPLWILGDVFLGPYVAVFD 381
            |.|:.::||..:.||.:||:.|: |:|..  |||.||..|.    ...||||||:|||....|||
  Fly   317 PNVNLNIGGTTYTLTPKDYIYKV-QADNNQTLCLSGFTYLQ----GNLLWILGDIFLGKVYTVFD 376

Mouse   382 RGDKNVGPRVGLARAQSRSTDR 403
            .|.:    |:|.|:.:..|:.|
  Fly   377 VGKE----RIGFAKLKKHSSYR 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NapsaNP_032463.1 pepsin_retropepsin_like 68..394 CDD:472175 144/327 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 391..419 4/13 (31%)
CG6508NP_609457.1 pepsin_retropepsin_like 68..386 CDD:472175 144/329 (44%)

Return to query results.
Submit another query.