DRSC/TRiP Functional Genomics Resources

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Protein Alignment DDX3X and Ddx3x

DIOPT Version :10

Sequence 1:NP_001347.3 Gene:DDX3X / 1654 HGNCID:2745 Length:662 Species:Homo sapiens
Sequence 2:NP_001385681.1 Gene:Ddx3x / 317335 RGDID:1564771 Length:662 Species:Rattus norvegicus


Alignment Length:662 Identity:653/662 - (98%)
Similarity:657/662 - (99%) Gaps:0/662 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGWSSSKD 65
            |||||||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||
  Rat     1 MSHVAVENALGLDQQFAGLDLNSSDNQTGGSTASKGRYIPPHLRNREATKGFYDKDSSGWSSSKD 65

Human    66 KDAYSSFGSRSDSRGKSSFFSDRGSGSRGRFDDRGRSDYDGIGSRGDRSGFGKFERGGNSRWCDK 130
            ||||||||||.|||||||||.|||||||||||||||.||||||.|||||||||||||||||||||
  Rat    66 KDAYSSFGSRGDSRGKSSFFGDRGSGSRGRFDDRGRGDYDGIGGRGDRSGFGKFERGGNSRWCDK 130

Human   131 SDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNI 195
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   131 SDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNI 195

Human   196 ELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRY 260
            ||||||||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||
  Rat   196 ELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYADGPGEALRAMKENGRY 260

Human   261 GRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPG 325
            ||||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||
  Rat   261 GRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQIRDLERGCHLLVATPG 325

Human   326 RLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQ 390
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   326 RLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATFPKEIQ 390

Human   391 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTLVFVETKKGAD 455
            ||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||||
  Rat   391 MLARDFLDEYIFLAVGRVGSTSENITQKVVWVEEIDKRSFLLDLLNATGKDSLTLVFVETKKGAD 455

Human   456 SLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPS 520
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   456 SLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPS 520

Human   521 DIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSR 585
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||
  Rat   521 DIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAFEHHYKGSSR 585

Human   586 GRSKSSRFSGGFGARDYRQSSGASSSSFSSSRASSSRSGGGGHGSSRGFGGGGYGGFYNSDGYGG 650
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   586 GRSKSSRFSGGFGARDYRQSSGASSSSFSSSRASSSRSGGGGHGSSRGFGGGGYGGFYNSDGYGG 650

Human   651 NYNSQGVDWWGN 662
            ||||||||||||
  Rat   651 NYNSQGVDWWGN 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DDX3XNP_001347.3 Required for TBK1 and IKBKE-dependent IFNB1 activation. /evidence=ECO:0000269|PubMed:18636090 2..139 131/136 (96%)
Nuclear export signal. /evidence=ECO:0000269|PubMed:30131165, ECO:0000269|PubMed:31575075 12..21 8/8 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 19..144 119/124 (96%)
Interaction with EIF4E. /evidence=ECO:0000269|PubMed:17667941 38..44 5/5 (100%)
Interaction with VACV protein K7. /evidence=ECO:0000269|PubMed:19913487 81..90 7/8 (88%)
Involved in binding to RNA G-quadruplex. /evidence=ECO:0000269|PubMed:30256975 88..123 32/34 (94%)
Interaction with GSK3B. /evidence=ECO:0000269|PubMed:18846110 100..662 555/561 (99%)
Interaction with IKBKE 100..110 8/9 (89%)
Interaction with CHUK. /evidence=ECO:0000269|PubMed:17667941 139..172 32/32 (100%)
DEADc_DDX3 160..410 CDD:350809 247/249 (99%)
Q motif 180..208 27/27 (100%)
Involved in stimulation of ATPase activity by DNA and RNA, nucleic acid binding and unwinding and HIV-1 replication 250..259 8/8 (100%)
DEAD box 347..350 2/2 (100%)
Interaction with HCV core protein. /evidence=ECO:0000269|PubMed:10329544 409..662 250/252 (99%)
SF2_C_DEAD 415..545 CDD:350174 128/129 (99%)
Interaction with NXF1. /evidence=ECO:0000269|PubMed:18596238 536..661 123/124 (99%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 601..634 32/32 (100%)
Ddx3xNP_001385681.1 DEADc_DDX3 160..410 CDD:350809 247/249 (99%)
SF2_C_DEAD 415..545 CDD:350174 128/129 (99%)

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