DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Kcns2 and Shawl

DIOPT Version :9

Sequence 1:NP_001258633.1 Gene:Kcns2 / 16539 MGIID:1197011 Length:477 Species:Mus musculus
Sequence 2:NP_001097131.2 Gene:Shawl / 5740840 FlyBaseID:FBgn0085395 Length:937 Species:Drosophila melanogaster


Alignment Length:529 Identity:152/529 - (28%)
Similarity:231/529 - (43%) Gaps:155/529 - (29%)


- Green bases have known domain annotations that are detailed below.


Mouse    16 DGEIRI--NVGGFKRRLRSHTLLRFPETRLGRLLLCHSREAILELCDDYDDVQREFYFDRNPELF 78
            |||.||  ||.|.:......||.:.|.|||.||         .|...:||.|..|::|||:|.:|
  Fly     2 DGENRIILNVSGIRYETYKATLKKIPATRLSRL---------TEALANYDPVLNEYFFDRHPGVF 57

Mouse    79 PYVLHFYHTGKLHVMAELCVFSFSQEIEYWGINEFFIDSCC--SYSYHG---------RKVEPEQ 132
            ..:|::|.|||||...::|...|.:|:|:||::...::.||  :||.|.         .|::.|.
  Fly    58 TQILNYYRTGKLHYPTDVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDKLDIEN 122

Mouse   133 EKWDEQSDQESTTSSFDEILAFYNDASKFDGQPLGNFRR---QLWLALDNPGYSVLSRVFSVLSI 194
            ||..|  :|.:....|:|.|:        :|: |..::|   ::|...|.|..|..:::.:.:|:
  Fly   123 EKPTE--EQIARLFGFEEALS--------NGE-LNCWQRIKPKIWAMFDEPSSSTGAKIVAGMSV 176

Mouse   195 LVVLGSIITMCLNSLPDFQI-----------PDSQGNP-GEDPRFE------------------- 228
            ..:..|:|:.||.:.|.|::           |.:.|.| |.||..|                   
  Fly   177 FFIFVSVISFCLKTHPGFRVDLPSGAHDAHGPGAGGPPHGHDPMGEPPQTHQYHQHSITPPSGSI 241

Mouse   229 -----------------------------------------------------IVEHFG------ 234
                                                                 |:.|.|      
  Fly   242 GPTFRVTNYTSYSSGNFTASGQATPIATIKGGQRQRLKRNINGSILNEFIEEKILGHNGRRKHGW 306

Mouse   235 ------------------IAWFTFELVARFAVAPDFLKFFKNALNLIDLMSIVPFYITLVVNLVV 281
                              ..||..|::.|..|:|:..:|.|:.:|:||..:.:.|| |.|:..:.
  Fly   307 IETYGQPHEAFFYVELVCNVWFFIEVIIRLIVSPNLWQFIKSPVNIIDFTATLSFY-TDVMQRMG 370

Mouse   282 ESSPTLANLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYKEVGLLLLYLSVGISIFSVV 346
            |.:..|       :...::||.|:.||.|||.|||.|..|.|.|.||:.||:.:|.:||..|:.:
  Fly   371 EYTGLL-------EAFSIVRIMRLFKLTRHSPGLRILIHTFKASAKELTLLVFFLVLGIVFFASL 428

Mouse   347 AYTIEK-EEN--EGLATIPACWWWATVSMTTVGYGDVVPGTTAGKLTASACILAGILVVVLPITL 408
            ||..|| ::|  ....:||...|||.|:|||||||||.|.|..|....:.|.|||:|.:.||:.:
  Fly   429 AYYAEKLQDNPDNQFKSIPLGLWWAIVTMTTVGYGDVAPKTYPGMFVGALCALAGVLTIALPVPV 493

Mouse   409 IFNKFSHFY 417
            |.:.||.||
  Fly   494 IVSNFSMFY 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kcns2NP_001258633.1 BTB_2 19..118 CDD:308049 36/100 (36%)
Ion_trans 186..421 CDD:306908 92/343 (27%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 374..379 4/4 (100%)
ShawlNP_001097131.2 BTB 7..99 CDD:197585 36/100 (36%)
BTB_2 7..97 CDD:280393 35/98 (36%)
Ion_trans 307..506 CDD:278921 75/204 (37%)
Ion_trans_2 <449..499 CDD:285168 24/49 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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