DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Kcnj6 and Irk3

DIOPT Version :9

Sequence 1:	NP_034736.2	Gene:	Kcnj6 / 16522	MGIID:	104781	Length:	425	Species:	Mus musculus
Sequence 2:	NP_001137835.2	Gene:	Irk3 / 35131	FlyBaseID:	FBgn0032706	Length:	446	Species:	Drosophila melanogaster

Alignment Length:	368	Identity:	114/368 - (30%)
Similarity:	198/368 - (53%)	Gaps:	39/368 - (10%)

- Green bases have known domain annotations that are detailed below.

Mouse    43 PRHISRDRTKRKIQRYVRKDGKCNVHHGNVRE-TYRYLTDIFTTLVDLKWRFNLLIFVMVYTVTW 106
            ||..|.|..:|.:.|.:.|:||.||....:.| ::||:.|:.|||::|:|::.|.:|:..|.::|
  Fly   103 PRTSSSDGLRRSLNRVMEKNGKENVVFRRIPEKSWRYMRDLVTTLMELEWKYMLTLFLGSYFLSW 167

Mouse   107 LFFGMIWWLIAYIRGDMDHIEDP--------SWTPCVTNLNGFVSAFLFSIETETTIGYGYRVIT 163
            |.|..:.:::||..||.  |.||        ...||:..::.:|:..::|:||:||:|:|.:..:
  Fly   168 LLFAALCYVVAYSHGDF--IFDPVSGKRMGEGVDPCIYGVHSWVAMIIYSVETQTTLGFGEKYAS 230

Mouse   164 DKCPEGIILLLIQSVLGSIVNAFMVGCMFVKISQPKKRAETLVFSTHAVISMRDGKLCLMFRVGD 228
            ::|||.|.|.::|.:..:::...||..::.|.::|.::...|.||..|||..|||:|||:|||.|
  Fly   231 EECPETIFLFVMQMLSAALIEGCMVSVIYAKTARPARQLTKLKFSDKAVICYRDGRLCLLFRVCD 295

Mouse   229 LRNSHIVEASIRAKLIKSKQTSEGEFIPLNQTDINVGYYTGDDRLFLVSPLIISHEINQQSPFWE 293
            .|....:|:.||..:|..|:|.|||.|. :..::.:   .|:....::.|.::.|.|::.||..:
  Fly   296 PREQQSIESKIRVYIIVDKRTREGETIK-SHVELKL---EGNGEQIILWPDVVCHVIDETSPLSQ 356

Mouse   294 ISKAQL-PKEELEIVVILEGMVEATGMTCQARSSYITSEILWGYRFTPVL--TLEDGFYEVDYNS 355
            .:.|:| ...:.|:.|.:.|...||....:|::||:..||.||.||..::  ..::..|.|||.:
  Fly   357 FTTAKLFNAAQFELYVSIVGTSPATAQMTEAKTSYLPREIFWGQRFVNIIHYDAQNERYIVDYEN 421

Mouse   356 FHETYETSTPSLSAKELAELANRAELPLSWSVSSKLNQHAELE 398
            |:.|.....|..:.|                     |.|.:||
  Fly   422 FNRTISVDMPMTNPK---------------------NDHLKLE 443

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Kcnj6	NP_034736.2	IRK	59..198	CDD:395797	46/147 (31%)
		Selectivity filter. /evidence=ECO:0000250	154..159		2/4 (50%)
		IRK_C	205..374	CDD:407551	57/171 (33%)
		Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	392..425		4/7 (57%)
		PDZ-binding	422..425
Irk3	NP_001137835.2	Ion_trans_2	119..432	CDD:304432	102/318 (32%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D289862at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR11767
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	4.020