DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kcnj11 and Irk3

DIOPT Version :9

Sequence 1:NP_034732.1 Gene:Kcnj11 / 16514 MGIID:107501 Length:390 Species:Mus musculus
Sequence 2:NP_001137835.2 Gene:Irk3 / 35131 FlyBaseID:FBgn0032706 Length:446 Species:Drosophila melanogaster


Alignment Length:336 Identity:122/336 - (36%)
Similarity:189/336 - (56%) Gaps:22/336 - (6%)


- Green bases have known domain annotations that are detailed below.


Mouse    24 PRYRTRE--RRA--RFVSKKGNCNVAHKNIREQG-RFLQDVFTTLVDLKWPHTLLIFTMSFLCSW 83
            ||..:.:  ||:  |.:.|.|..||..:.|.|:. |:::|:.|||::|:|.:.|.:|..|:..||
  Fly   103 PRTSSSDGLRRSLNRVMEKNGKENVVFRRIPEKSWRYMRDLVTTLMELEWKYMLTLFLGSYFLSW 167

Mouse    84 LLFAMVWWLIAFAHGDL--------APGEGTNVPCVTSIHSFSSAFLFSIEVQVTIGFGGRMVTE 140
            ||||.:.:::|::|||.        ..|||.: ||:..:||:.:..::|:|.|.|:|||.:..:|
  Fly   168 LLFAALCYVVAYSHGDFIFDPVSGKRMGEGVD-PCIYGVHSWVAMIIYSVETQTTLGFGEKYASE 231

Mouse   141 ECPLAILILIVQNIVGLMINAIMLGCIFMKTAQAHRRAETLIFSKHAVITLRHGRLCFMLRVGDL 205
            |||..|.:.::|.:...:|...|:..|:.|||:..|:...|.||..|||..|.||||.:.||.|.
  Fly   232 ECPETIFLFVMQMLSAALIEGCMVSVIYAKTARPARQLTKLKFSDKAVICYRDGRLCLLFRVCDP 296

Mouse   206 RKSMIISATIHMQVVRKTTSPEGEVVPLHQVDIPMENGVGGNGIFLVA-PLIIYHVIDSNSPLYD 269
            |:...|.:.|.:.::....:.|||.:..| |::.:|    |||..::. |.::.||||..|||..
  Fly   297 REQQSIESKIRVYIIVDKRTREGETIKSH-VELKLE----GNGEQIILWPDVVCHVIDETSPLSQ 356

Mouse   270 LAPSDLHHHQDLEIIVILEGVVETTGITTQARTSYLADEILWGQRFVPIV--AEEDGRYSVDYSK 332
            ...:.|.:....|:.|.:.|....|...|:|:||||..||.||||||.|:  ..::.||.|||..
  Fly   357 FTTAKLFNAAQFELYVSIVGTSPATAQMTEAKTSYLPREIFWGQRFVNIIHYDAQNERYIVDYEN 421

Mouse   333 FGNTIKVPTPL 343
            |..||.|..|:
  Fly   422 FNRTISVDMPM 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kcnj11NP_034732.1 IRK 36..174 CDD:395797 52/146 (36%)
Selectivity filter. /evidence=ECO:0000250 130..135 3/4 (75%)
IRK_C 181..354 CDD:407551 64/166 (39%)
Irk3NP_001137835.2 Ion_trans_2 119..432 CDD:304432 116/318 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843286
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D289862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11767
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.950

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