DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ush1g and Sans

DIOPT Version :9

Sequence 1:NP_789817.1 Gene:Ush1g / 16470 MGIID:2450757 Length:461 Species:Mus musculus
Sequence 2:NP_610829.1 Gene:Sans / 36427 FlyBaseID:FBgn0033785 Length:516 Species:Drosophila melanogaster


Alignment Length:549 Identity:181/549 - (32%)
Similarity:271/549 - (49%) Gaps:124/549 - (22%)


- Green bases have known domain annotations that are detailed below.


Mouse     2 NDQYHRAARDGYLELLKEATRKELNAPDEDGMTPTLWAAYHGNLESLRLIVSRGGDPDKCDIWGN 66
            :|::|:||:||.|::|..||||:.||.|.|.|||.:|||:.|.|::|||:..|||||||||.:||
  Fly     3 SDRFHKAAKDGLLDVLAAATRKDTNAKDSDSMTPVMWAAFEGRLDALRLLCGRGGDPDKCDQFGN 67

Mouse    67 TPLHLAASNGHLHCLSFLVSFGANIWCLDNDYHTPLDMAAMKGHMECVRYLDSIAAKQSSLNPKL 131
            |.||||::.|||||:.|||.||.||:.||.|.|:..|:||:.|..|.:||||.......:...|.
  Fly    68 TALHLASAKGHLHCVDFLVKFGVNIYALDIDKHSAKDLAAINGRDEILRYLDVAFTNFEATEKKK 132

Mouse   132 VGKLKDKAFREAERRIRECAKMQRKHHERMERRYRRELAERSD--TLSFSSLTSSTLSRRLQHMT 194
            ...||:.|.:..|:|:||..|.|.:..:|.:..|       ||  ..|.||.|.:.||      |
  Fly   133 SKALKELAEKNCEKRVREYMKRQNQQQQRQDPEY-------SDLSAPSGSSKTGNMLS------T 184

Mouse   195 LGSQLPYSQATLHGT--------------------------AKGKAKIQKK-LERRKQGG----- 227
            |..::..||..|:.|                          |.....:||: .:.:||..     
  Fly   185 LKQKIWSSQGNLNKTPRDTPPPTKFSDLVGNGSSSSGGSTIASRAGTVQKRPSQLQKQHSSTCPH 249

Mouse   228 -------EGTFKVSE---DGRKSVRSLSGLQLGSDVMFVRQGTYANPKE--WGRAPLRDMF---- 276
                   :|.|||.|   ||::::.||:|||..|:|::|  ||:::.::  ..|..:.|:|    
  Fly   250 SKISSDTDGGFKVREVEPDGKRTITSLTGLQRDSEVLYV--GTFSSNEDSVGKRGKISDVFECME 312

Mouse   277 -----LSDEDSVSRATLAAEPAHSEVSTDSGHD-------------SLFTRPG-LGTMVFRRNYV 322
                 .||..|...:|||...:..::..|....             .||.||. ||::.|||:..
  Fly   313 ADELDHSDNRSGYSSTLARSFSQPDILGDGQLTQELSEEVTLQRPVGLFDRPTMLGSIAFRRSVT 377

Mouse   323 --------------SSGLHGLG------REDGGLDGAGTPRGRLHSSPSLDDDSLGSANSLQDRS 367
                          :|.:...|      |..||       :|||:.:.|.|.||.|..:.:    
  Fly   378 AALSQLQLHTDTSSTSTMRNAGSNPPKTRNGGG-------KGRLYLNLSDDTDSEGGGHDI---- 431

Mouse   368 CGEELPWDELDLGLDEDLEPETSPLETFLASLHMEDFASLLRHEKIDLEALMLCSDLDLRSISVP 432
                  :.:.|   |:|.:...|.|:.|||...:|::..:.:.::||||.|||.::.||:|:.:|
  Fly   432 ------YSDDD---DDDRDAGGSALQRFLAVWALEEYLPVFQKQEIDLETLMLLTESDLKSLGLP 487

Mouse   433 LGPRKKILGAVRRRRQALERPLALEDTEL 461
            |||.:|:..|::.||.||..|..|.|:.|
  Fly   488 LGPFRKLTFAIQERRNALANPGPLVDSRL 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ush1gNP_789817.1 Ank_4 5..52 CDD:372654 26/46 (57%)
ANK repeat 31..62 CDD:293786 19/30 (63%)
ANK 1 31..60 17/28 (61%)
Ank_2 38..117 CDD:372319 46/78 (59%)
ANK repeat 64..95 CDD:293786 19/30 (63%)
ANK 2 64..93 19/28 (68%)
ANK 3 97..126 11/28 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 329..368 12/44 (27%)
SAM_USH1G 388..453 CDD:188985 26/64 (41%)
SansNP_610829.1 ANK 6..118 CDD:238125 64/111 (58%)
Ank_2 6..96 CDD:289560 54/89 (61%)
ANK repeat 35..63 CDD:293786 17/27 (63%)
ANK repeat 65..96 CDD:293786 19/30 (63%)
Ank_2 70..149 CDD:289560 35/78 (45%)
SAM_USH1G_HARP 443..508 CDD:188916 26/64 (41%)
SAM 447..503 CDD:197735 22/55 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849778
Domainoid 1 1.000 50 1.000 Domainoid score I11593
eggNOG 1 0.900 - - E33208_3BEMZ
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56113
Inparanoid 1 1.050 238 1.000 Inparanoid score I3357
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG50165
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002068
OrthoInspector 1 1.000 - - otm43982
orthoMCL 1 0.900 - - OOG6_108131
Panther 1 1.100 - - LDO PTHR24161
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5090
SonicParanoid 1 1.000 - - X2368
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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