DRSC/TRiP Functional Genomics Resources

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Protein Alignment Itgb3 and Itgbn

DIOPT Version :10

Sequence 1:NP_058060.2 Gene:Itgb3 / 16416 MGIID:96612 Length:787 Species:Mus musculus
Sequence 2:NP_523608.2 Gene:Itgbn / 35368 FlyBaseID:FBgn0010395 Length:799 Species:Drosophila melanogaster


Alignment Length:810 Identity:258/810 - (31%)
Similarity:392/810 - (48%) Gaps:76/810 - (9%)


- Green bases have known domain annotations that are detailed below.


Mouse     9 LWAALLALGALAGVVVGESNICTTRGVNSCQQCLAVSPVCAWCSDETLSQGSPRCNLKENLLKDN 73
            ||..|:.|.|.......:|.....|..:||::||:....||||:|:....|. ||..:..||..|
  Fly    10 LWIYLVFLIAEISHSDADSIDDQCRHADSCERCLSAHLECAWCTDKEYQVGY-RCLSRRQLLNYN 73

Mouse    74 CAPESIEFPVSEAQILEARPLSSKGSGSSAQITQVSPQRIALRLRPDDSKIFSLQVRQVEDYPVD 138
            |:...|........:|:.:||  |...:|.|..||:|||..|:|...:::...|..|...:.|:|
  Fly    74 CSETDIYENQPVLDVLQDKPL--KDYETSDQAVQVTPQRAYLKLVKGNTQRMKLSYRTARNNPLD 136

Mouse   139 IYYLMDLSFSMKDDLSSIQTLGTKLASQMRKLTSNLRIGFGAFVDKPVSPYMYISPPQAIKNPCY 203
            :|.||||:::|:||..:::.||.:|:..::.||.|.|:|||:|.|||..|.:.   ||..:|||.
  Fly   137 LYVLMDLTWTMRDDKKTLEELGAQLSQTLKNLTGNYRLGFGSFADKPTLPMIL---PQHRENPCA 198

Mouse   204 NMKNACLPMFGYKHVLTLTDQVSRFNEEVKKQSVSRNRDAPEGGFDAIMQATVCDEKIGWRNDAS 268
            ..:..|.|.:||:|.|:|||.:..|...|....::.|.|..|||.||:||..||.::|||:..|.
  Fly   199 AERATCEPTYGYRHQLSLTDDIPAFTSAVANSKITGNLDNLEGGLDALMQVIVCTKEIGWKEQAR 263

Mouse   269 HLLVFTTDAKTHIALDGRLAGIVLPNDGHCHIGTDNHYSASTTMDYPSLGLMTEKLSQKNINLIF 333
            .:::..||...|:|.||.||||:..||..||:.....|:.|...|||||..:..:|.::.||:||
  Fly   264 KVVILVTDGFMHLAGDGLLAGIIQRNDKQCHLNKAGEYTGSLNYDYPSLEEIYRELLRRKINVIF 328

Mouse   334 AVTENVVSLYQNYSELIPGTT-VGVLSDDSSNVLQLIVDAYGKIRSKVELEVRDLPEELSLSFNA 397
            ||||.|||.|...|.|:...: |.:||.||||:|:||..:|..:..:.:. ..:.|:.:.:::..
  Fly   329 AVTEEVVSSYWELSALMKEISYVDILSADSSNILELIKKSYESLIKRTQF-ADNSPDFIDMAYYT 392

Mouse   398 TCLNNEVIPGLKS---CVGLKIGDTVSFSIEAKVRGCPQEKEQSFT----IKPVGFKDSLTVQVT 455
            .|  ....|.|:.   |..:.:|..:.|.::..::..|.  .|.:|    ::.....:.:.:.|.
  Fly   393 DC--GGQFPSLQKRNYCNNVTLGKQIDFYVDVTLKKYPD--NQVYTHKIRVEETSLSEFMDLDVE 453

Mouse   456 FDCDCACQAFAQPSSPR----CNNGNGTFECGVCRCDQGWLGSMCECSEEDYRPSQQEECSPKEG 516
            ....|.||....|.:..    |:. .|...||:|.||:||.|:.|.|..:....:..|....|..
  Fly   454 LQRPCPCQETPDPENEEGRFLCDY-KGYLYCGMCECDEGWTGTYCNCPTDATNVTSNEALLQKCR 517

Mouse   517 QP---------ICSQRGECLCGQCVCHSSDFGKITGKYCECDDFSCVRYKGEMCSGHGQCNCGDC 572
            ||         :||..|:|.||.|:|   |.| .||.:|||.:  |:....::    ..|.||.|
  Fly   518 QPFSDKSTSELVCSNHGDCDCGTCLC---DPG-YTGPFCECRE--CLDCDEKL----ADCFCGQC 572

Mouse   573 VCDSDWTGYYCNCTTRTDTCMSTNGLLCSGRGNCECGSCVCVQPGSYGDTCEKCPTCPD-ACSFK 636
            ||...|:|..|||...||.|:...|.:||.||.|:|..|.|.:| ..|..||..|...: .|.|.
  Fly   573 VCKYGWSGSKCNCDGDTDACVGPTGEICSERGTCQCEECQCEEP-YLGKFCEIDPEKDNKLCLFY 636

Mouse   637 KECVECKKFNRGTLHEENTCSRYCRDDIEQVKELTDTGKNAVNCTYK---NEDDCVVR------- 691
            :.||.|       |.|:......|.:..|....|........|..::   .:|.|:||       
  Fly   637 EPCVTC-------LIEQKQGMGVCENLTEICSSLDRQETYPYNFVHELDPEQDQCLVRLVNKHGI 694

Mouse   692 ----FQYYE--DTSGRAVLYVVE-EPECPKGPDILVVLLSVMGAILLIGLATLLIWKLLITIHDR 749
                |..|:  |.|....:..|: ||     ||.:.::..:....|||||..:.|....|...|.
  Fly   695 QCDSFFVYQVIDHSNFLTIQAVDCEP-----PDYVALVGYISAFTLLIGLLIIFIILWYIRAKDA 754

Mouse   750 KEFAKFEEERARAKWDTANNPLYKEATSTF 779
            :|:|||||::..:.  ...||:|::....:
  Fly   755 REYAKFEEDQKNSV--RQENPIYRDPVGRY 782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Itgb3NP_058060.2 INB 37..460 CDD:197563 146/430 (34%)
CX3CL1-binding. /evidence=ECO:0000250|UniProtKB:P05106 202..209 1/6 (17%)
Involved in CX3CL1-, NRG1-, FGF1-and IGF1-binding. /evidence=ECO:0000250|UniProtKB:P05106 202..209 1/6 (17%)
CX3CL1-binding. /evidence=ECO:0000250|UniProtKB:P05106 292..312 6/19 (32%)
I-EGF_1 462..491 CDD:465729 10/32 (31%)
Integrin_B_tail 633..716 CDD:462325 22/99 (22%)
Integrin_b_cyt 744..784 CDD:462580 11/36 (31%)
LIR. /evidence=ECO:0000250|UniProtKB:P05106 776..782 0/4 (0%)
ItgbnNP_523608.2 INB 38..460 CDD:197563 147/432 (34%)
EGF_2 529..552 CDD:400365 12/26 (46%)
Integrin_b_cyt 752..785 CDD:462580 10/33 (30%)

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