DRSC/TRiP Functional Genomics Resources

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Protein Alignment Itgb2l and Itgbn

DIOPT Version :9

Sequence 1:XP_006522991.1 Gene:Itgb2l / 16415 MGIID:1277979 Length:795 Species:Mus musculus
Sequence 2:NP_001303333.1 Gene:Itgbn / 35368 FlyBaseID:FBgn0010395 Length:799 Species:Drosophila melanogaster


Alignment Length:760 Identity:199/760 - (26%)
Similarity:332/760 - (43%) Gaps:120/760 - (15%)


- Green bases have known domain annotations that are detailed below.


Mouse    29 NVSTCQDCIRSGPSCAWCQKLNFTGRGEPDSVRCDTPEQLLLKGCTSEYLVDPKSLAESQEDK-- 91
            :..:|:.|:.:...||||     |.:......||.:..|||...|:...:.:.:.:.:..:||  
  Fly    35 HADSCERCLSAHLECAWC-----TDKEYQVGYRCLSRRQLLNYNCSETDIYENQPVLDVLQDKPL 94

Mouse    92 ----ERDQR-QLSPRNVTVFLRPGQAATFKVDFQRTQDNSVDLYFLMGLSGSAQGHLSNVQTLGS 151
                ..||. |::|:...:.|..|.....|:.::..::|.:|||.||.|:.:.:.....::.||:
  Fly    95 KDYETSDQAVQVTPQRAYLKLVKGNTQRMKLSYRTARNNPLDLYVLMDLTWTMRDDKKTLEELGA 159

Mouse   152 DLLKALNEISRSGRIGFGSIVNMT--------------------------FQHILKLTADSSQFQ 190
            .|.:.|..::.:.|:||||..:..                          ::|.|.||.|...|.
  Fly   160 QLSQTLKNLTGNYRLGFGSFADKPTLPMILPQHRENPCAAERATCEPTYGYRHQLSLTDDIPAFT 224

Mouse   191 RELRKQLVSGKLATPKGQLDAVVQVAICLGEIGWRNGTR-FLVLVTDNDFHLAKDKTLGTRQNTS 254
            ..:....::|.|...:|.|||::||.:|..||||:...| .::||||...|||.|..|......:
  Fly   225 SAVANSKITGNLDNLEGGLDALMQVIVCTKEIGWKEQARKVVILVTDGFMHLAGDGLLAGIIQRN 289

Mouse   255 DGRCHLDD-GMYRSRGEPDYQSVVQLASKLAENNIQPIFVVPSRMVKTYEKLTTFIPKLT-IGEL 317
            |.:|||:. |.|......||.|:.::..:|....|..||.|...:|.:|.:|:..:.::: :..|
  Fly   290 DKQCHLNKAGEYTGSLNYDYPSLEEIYRELLRRKINVIFAVTEEVVSSYWELSALMKEISYVDIL 354

Mouse   318 SDDSSNVAQLIRNAYSKLSSIVVLNHSTIPSILKVTYDSYCSNGTSNPG-KPSGDCSGVQINDQV 381
            |.||||:.:||:.:|..|........:: |..:.:.|.:.|  |...|. :....|:.|.:..|:
  Fly   355 SADSSNILELIKKSYESLIKRTQFADNS-PDFIDMAYYTDC--GGQFPSLQKRNYCNNVTLGKQI 416

Mouse   382 TFQVNITASECFREQFFF-------IQALGFMDSVTVRVLPLCECQ---CQEQSQHHSLCGGKGA 436
            .|.|::|..:....|.:.       .....||| :.|.:...|.||   ..|..:...||..||.
  Fly   417 DFYVDVTLKKYPDNQVYTHKIRVEETSLSEFMD-LDVELQRPCPCQETPDPENEEGRFLCDYKGY 480

Mouse   437 MECGICRCNSGYAGKNCECQTQG---PSSQDLEGSCR-----KDNSSIMCSGLGDCICGQCECHT 493
            :.||:|.|:.|:.|..|.|.|..   .|::.|...||     |..|.::||..|||.||.|.|  
  Fly   481 LYCGMCECDEGWTGTYCNCPTDATNVTSNEALLQKCRQPFSDKSTSELVCSNHGDCDCGTCLC-- 543

Mouse   494 SDIPNKEIYGQYCECNN-VNCERYDGQVCGGPERGHCSCGRCFCRYGFVGSACQCRMSTSGCLNN 557
                :....|.:|||.. ::|:.         :...|.||:|.|:||:.||.|.|...|..|:..
  Fly   544 ----DPGYTGPFCECRECLDCDE---------KLADCFCGQCVCKYGWSGSKCNCDGDTDACVGP 595

Mouse   558 RMVECSGHGRCYCNRCLCDPGYQPPLCEKRPGYFHR-CSEYYSCARCLKDN-------------- 607
            ....||..|.|.|..|.|:..|....||..|...:: |..|..|..||.:.              
  Fly   596 TGEICSERGTCQCEECQCEEPYLGKFCEIDPEKDNKLCLFYEPCVTCLIEQKQGMGVCENLTEIC 660

Mouse   608 SAIKCREC--WNLLFSNTPFSNKTCMTERDSEG--CWTTYTLYQP-DQSDINSIYIKESLVC--- 664
            |::..:|.  :|.:....|..::..:...:..|  | .::.:||. |.|:..:|   :::.|   
  Fly   661 SSLDRQETYPYNFVHELDPEQDQCLVRLVNKHGIQC-DSFFVYQVIDHSNFLTI---QAVDCEPP 721

Mouse   665 ------AEISNTTILLGVIVGVLLAVIFLLVYCMVYLKGTQKAAK 703
                  ..||..|:|:|      |.:||:::: .:..|..::.||
  Fly   722 DYVALVGYISAFTLLIG------LLIIFIILW-YIRAKDAREYAK 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Itgb2lXP_006522991.1 vWFA 32..419 CDD:381780 111/430 (26%)
I-EGF_1 417..448 CDD:375798 12/33 (36%)
Integrin_B_tail 594..666 CDD:369622 17/99 (17%)
ItgbnNP_001303333.1 INB 38..460 CDD:197563 111/430 (26%)
EGF_2 524..552 CDD:285248 11/33 (33%)
Integrin_b_cyt 748..785 CDD:285884 3/12 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1226
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D223415at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100678
Panther 1 1.100 - - O PTHR10082
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
76.780

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