DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCX and DCX-EMAP

DIOPT Version :10

Sequence 1:NP_000546.2 Gene:DCX / 1641 HGNCID:2714 Length:441 Species:Homo sapiens
Sequence 2:NP_001261850.1 Gene:DCX-EMAP / 39617 FlyBaseID:FBgn0259099 Length:1118 Species:Drosophila melanogaster


Alignment Length:397 Identity:103/397 - (25%)
Similarity:165/397 - (41%) Gaps:83/397 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    47 SHVGMCEETDASFNVFSPKFQFDRS-HCQSLRFHQNMELDFG--------------HFDERDKTS 96
            |::....:::.|....|||.....| ..|:...:.|.|.|..              ::.:|:..:
  Fly    49 SNINGNNDSNRSSPAKSPKRPVSSSFRIQNTSRYDNDEEDLAASEQVAGGDRQVPDYWQQRNGAT 113

Human    97 RNMRGSRMNGLPSPTHSAHCS----------FYRTRTLQALSNEK----------KAKKVRFYRN 141
            ......|.:...||.:..:.|          ..|:::...:|:..          ||::|.||||
  Fly   114 TGATSGRQSRAISPGYLDNMSENSEQPPVVPLVRSKSRPEISSAAASRYNNLSYWKARRVVFYRN 178

Human   142 GDRYFKGIVYAVSSDRFR------SFDALLADLTRSLSDNINLPQGVRYIYTIDGSRKIGSMDEL 200
            ||.:|.|:..     |:|      |.|.||    ..:|..::||:|.||::::||.||. .:|||
  Fly   179 GDPFFPGVEL-----RYRPGRDVTSLDNLL----DKISPKMDLPRGARYVFSMDGDRKY-HLDEL 233

Human   201 EEGESYVCSSDNFFKKVEYTKN--------VNPNWS---VNVKTSANMKAPQSLASSNSAQAREN 254
            |:|..||.||...||...|.|.        .|..|.   .:.|.|. |:|.....|:.|...:.:
  Fly   234 EDGAFYVVSSFKAFKPASYGKKNGMWYASPGNQGWGSKPASRKPSI-MEADLGTLSTTSGSIKRS 297

Human   255 KDFVRPKLVTIIRSGVKPRKAVRVLLNKKTAHSFEQVLTDITEAIKLETGVVKKLYTLDGKQV-- 317
            ..    :::.|| :.:......|||||.:|:..||:||.|:.:.:|:..  .||:||..|::|  
  Fly   298 AG----RVIRII-NNLDHSVQCRVLLNLRTSQPFEEVLEDLGQVLKING--AKKMYTGTGQEVRS 355

Human   318 -TCLHDFFGDDDVF-IACGPEKFRYAQDDFSLDENECRVMKGNPSATAGPKASPTPQKTSAKSPG 380
             :.|.:.|.|.|.| :|.|..         .:..:..|..:..||..|.....||.:.......|
  Fly   356 FSQLRNEFADVDTFYLATGTA---------LIAGSPIRRSRSRPSVVAAAPILPTDELPKVPLRG 411

Human   381 PMRRSKS 387
            ...||||
  Fly   412 ARPRSKS 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCXNP_000546.2 DCX1_DCX 132..220 CDD:340529 38/93 (41%)
DCX2 257..340 CDD:340589 27/86 (31%)
KLF8_12_N <365..>419 CDD:424081 7/23 (30%)
DCX-EMAPNP_001261850.1 DCX 166..253 CDD:214711 38/96 (40%)
DCX2_RP_like 300..372 CDD:340590 25/74 (34%)
HELP 449..515 CDD:460922
WD40 520..562 CDD:459801
WD40 repeat 530..573 CDD:293791
WD40 548..959 CDD:441893
WD40 repeat 582..624 CDD:293791
WD40 repeat 627..664 CDD:293791
WD40 repeat 673..712 CDD:293791
WD40 repeat 718..801 CDD:293791
WD40 repeat 806..838 CDD:293791
WD40 repeat 846..880 CDD:293791
WD40 847..>1073 CDD:475233
WD40 repeat 886..918 CDD:293791
WD40 repeat 931..969 CDD:293791
WD40 repeat 1002..1037 CDD:293791
Blue background indicates that the domain is not in the aligned region.

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