Sequence 1: | NP_001240801.1 | Gene: | Itgal / 16408 | MGIID: | 96606 | Length: | 1162 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001162777.1 | Gene: | if / 32661 | FlyBaseID: | FBgn0001250 | Length: | 1396 | Species: | Drosophila melanogaster |
Alignment Length: | 1174 | Identity: | 274/1174 - (23%) |
---|---|---|---|
Similarity: | 425/1174 - (36%) | Gaps: | 375/1174 - (31%) |
- Green bases have known domain annotations that are detailed below.
Mouse 10 LLLLGLQLFAKAWSYNLDTRPTQSFLAQAGRHFGYQVL-----------QIEDGVVVGAP----- 58
Mouse 59 --GEG-DNTGGLYHCRTSSEFCQ--PVSLHGSNH----------TSKYLGMTLATDAAKGSLLAC 108
Mouse 109 DPGLSRTCDQNTYLSGLCYLFPQSLEGPMLQNRPAYQECMKGKVDLVFLFDGSQSLDRKDFEKIL 173
Mouse 174 EFMKDVMRKLSNTSYQFAAVQFSTDCRTEFTFLDYVKQNKNPDVLLGSVQPMFLLTNTFRAINYV 238
Mouse 239 VAHVFKEESGARPDATKVLVIITDGEASDK---------GNISAAHDITRYIIGIGKHFVSVQKQ 294
Mouse 295 KTLHIFASEPVEEFVKILDTFEKLKDLFTDLQRRIYAIEGTNRQDLTSFNMELSSSGISADLSKG 359
Mouse 360 HAVVGAVGAKDWAGGFLDLREDLQGATFVGQEPLTSDVRGGYLGYTVAWMTSRSSRPLLAAGAPR 424
Mouse 425 YQHVGQVLLFQAPEAGGRWNQTQ--KIEGTQIGSYFGGELCSVDLDQDGEAELLLIGAPLFF--- 484
Mouse 485 ---GEQRGGRVFTYQRRQSLFEMVSELQGDP-------------GY-PLGRFGAAITALTDINGD 532
Mouse 533 RLTDVAVGAPL---EEQGAVYIFNGKPGGLSPQPSQRIQGAQVFPGI---RWFGRSIHGVKDLGG 591
Mouse 592 DRLADVVVGA--EGRVVVLSSRPVVDVVTELSFSPEE--IPVHEVECSYSAREEQKHGVKLKACF 652
Mouse 653 RIKPLTPQFQGRLL-ANLSYTLQ--LDGHRMRSRGLF---PDGSHELSGNTSIT-PDKSCLDFHF 710
Mouse 711 HFPICIQDLISPINVSLNFSLLEEEGTPRDQKVGRAMQPILRPSIH-----TVTKEIPFEKNCGE 770
Mouse 771 DKKCEANLTLSSPARSGPLRLMSSASLAVEWTLSNSGEDAYWVRLDLDFPRGLSFRKVEMLQPHS 835
Mouse 836 RMPVSCEELTEGSSLLTKTLKCNVSSPIFKAGQ----EVSLQVMFNTLLNSSWEDFVELNGTVHC 896
Mouse 897 ENENSSLQEDNS---------------AATHIP--VLYPVNILTKEQENSTLYISFTPKGPKTQQ 944
Mouse 945 VQHVYQVRIQPSAYDHNMPTL--EALVGVPWPHSE---DPITYTWSVQTDPLVTCHSEDLKRPSS 1004
Mouse 1005 EAEQPCLPGVQFRC-PIVFR-----------REILIQVTGTVELSKEIKASSTLSLCSSLSVSFN 1057
Mouse 1058 SSKH 1061 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Itgal | NP_001240801.1 | FG-GAP 5. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 444..504 | 24/67 (36%) | |
FG-GAP 6. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 505..561 | 32/72 (44%) | |||
FG-GAP 7. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 565..625 | 23/64 (36%) | |||
GFFKR motif | 1112..1116 | ||||
FG-GAP 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 28..79 | 13/71 (18%) | |||
FG-GAP 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 80..138 | 12/67 (18%) | |||
FG-GAP 3. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 336..387 | 9/50 (18%) | |||
FG-GAP 4. /evidence=ECO:0000255|PROSITE-ProRule:PRU00803 | 390..443 | 6/52 (12%) | |||
if | NP_001162777.1 | Int_alpha | 46..110 | CDD:214549 | 13/63 (21%) |
Int_alpha | 275..>316 | CDD:214549 | 16/89 (18%) | ||
Int_alpha | 398..451 | CDD:214549 | 29/52 (56%) | ||
Int_alpha | 466..>497 | CDD:214549 | 10/30 (33%) | ||
Integrin_alpha2 | 499..893 | CDD:285619 | 107/448 (24%) | ||
DUF2756 | <1120..1178 | CDD:298627 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167832049 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3637 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |