Sequence 1: | NP_034706.3 | Gene: | Itga4 / 16401 | MGIID: | 96603 | Length: | 1032 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001162777.1 | Gene: | if / 32661 | FlyBaseID: | FBgn0001250 | Length: | 1396 | Species: | Drosophila melanogaster |
Alignment Length: | 1056 | Identity: | 272/1056 - (25%) |
---|---|---|---|
Similarity: | 455/1056 - (43%) | Gaps: | 187/1056 - (17%) |
- Green bases have known domain annotations that are detailed below.
Mouse 22 LLLYFGVPTGHSYNLDPENALLYQGPSGTLFGYSVVLHS-----HGSKR--WLIVGAP---TASW 76
Mouse 77 LSNASVVNPGAIYRCGIRKNPNQTCEQLQLGSP-SGEPCGKTCLEERDNQWLGVTLSRQPGENGS 140
Mouse 141 -IVTCGHRWKNIFYMKSDNKL----PTGICYVMPSDLRTELSKRMAPCYKDYTRKFG-ENFASCQ 199
Mouse 200 AGISSFYTQD--LIVMGAPGSSYWTGTVF-------------------------VYNITTNQYKA 237
Mouse 238 FVDRQN-QVKFGSYLGYSVGAGHFRSPHTTEVVGGAPQHEQIGKAYIFSIDENELNI--VYEMKG 299
Mouse 300 KKLGSYFGASVCAVDLNADGFSDLLVGAPMQST------IREEGRVFVYINSGMGAVMVEMERVL 358
Mouse 359 VG--SDKY--AARFGESIANLGDIDNDGFEDIAIGAPQE-DDLRGAVYIYNGRVDGISSTYSQRI 418
Mouse 419 EGQQISKSL---RMFGQSISGQIDADNNGYVDVAVGAFQSDSAVLLRTRPVVIVEASLSHPESVN 480
Mouse 481 RTKFD---C----TENGLPSVCMHLTLCFSYKGKEVPGYIVLFYNVS--LDVHRKAESPSRFYFF 536
Mouse 537 SNGTSDVITGSIRVSSSGEKCRTHQAFMRKDVRDILTPIHVEATYHLGHHVITKRNTEEFPP--- 598
Mouse 599 -----LQPILQQKKEKDVIRKMINFARFCAYEN-CSADLQVSAKVGFLKPYENKTYLAVGSMKTI 657
Mouse 658 MLNVSLFNAGDDAYETTLNVQLPTGLYFIKILDLEEKQ---INCEVTESSGIVKLACSLGY-IYV 718
Mouse 719 DRLSRIDISFLLDVSSLSRAHEDLSISVHA-SCENEGELDQVRDNRVTLTIPLRYEVMLTVHGLV 782
Mouse 783 NPTSFVYGSSEENEPETCMAE-----KLNLTFHVINTGISMAPNVSVKIMVPNSFLPQDDKLFNV 842
Mouse 843 LDVQTTTG--QCH---FKHYGRECTFAQQKGIAGTLTD--IVKFLSKTDKRLLYCMKADQHCLDF 900
Mouse 901 LCNFGKMESGKEASVHIQL---EG-RPSILEMDETSSLKFEIKATAFPEPHPKVIELNKDENVAH 961
Mouse 962 VFLEGL------HHQR 971 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Itga4 | NP_034706.3 | Int_alpha | 48..105 | CDD:214549 | 17/66 (26%) |
Int_alpha | 303..351 | CDD:214549 | 19/53 (36%) | ||
Int_alpha | 366..418 | CDD:214549 | 22/52 (42%) | ||
Int_alpha | 429..479 | CDD:214549 | 21/49 (43%) | ||
Integrin_alpha2 | 463..902 | CDD:285619 | 113/473 (24%) | ||
if | NP_001162777.1 | Int_alpha | 46..110 | CDD:214549 | 17/68 (25%) |
Int_alpha | 275..>316 | CDD:214549 | 14/44 (32%) | ||
Int_alpha | 398..451 | CDD:214549 | 22/52 (42%) | ||
Int_alpha | 466..>497 | CDD:214549 | 15/30 (50%) | ||
Integrin_alpha2 | 499..893 | CDD:285619 | 103/419 (25%) | ||
DUF2756 | <1120..1178 | CDD:298627 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167832104 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3637 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.740 |