DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Itch and Nedd4

DIOPT Version :9

Sequence 1:NP_001230641.1 Gene:Itch / 16396 MGIID:1202301 Length:864 Species:Mus musculus
Sequence 2:NP_648993.1 Gene:Nedd4 / 39958 FlyBaseID:FBgn0259174 Length:1007 Species:Drosophila melanogaster


Alignment Length:1069 Identity:344/1069 - (32%)
Similarity:468/1069 - (43%) Gaps:336/1069 - (31%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MSDSGPQLDSMGSLTMKSQLQITVISAKLKENKKNWFGPS-PYV---------EVTVDGQSKKTE 55
            ::|||   ||       ..|:|.|::.: ...||:.||.| |||         ::.:|....||:
  Fly    63 VNDSG---DS-------CHLRIVVLTGQ-SLAKKDIFGASDPYVRIDLNTINGDINIDSVLTKTK 116

Mouse    56 KCNNTNSPKWKQPLTVIVTPTS-KLCFRVWSHQTLKSDVLLGTAGLDIYETLKSNNMKLEEVVMT 119
            |  .|.:|.|.:.....|.|:. ||.|:|:....|..|..||.                  |.:|
  Fly   117 K--KTLNPTWNEEFIFRVKPSEHKLVFQVFDENRLTRDDFLGM------------------VELT 161

Mouse   120 LQLVGDKEPTETMGDLSVCLDGLQVEAEVVTNGETSCSESTTQNDDGCRTRDDTRVSTNGSEDPE 184
            |..:..::...|:|:.|..|                            |.|              
  Fly   162 LVNLPTEQEGRTIGEQSYTL----------------------------RPR-------------- 184

Mouse   185 VAASGENKRANGNNSPSLSNGGFKPSRPPRPSRPPPPTPR-RPASVNGSPSTNSDSDGSSTGSLP 248
             .:.|...|..|                         |.| ..|.:..:...:..|.|:|.|...
  Fly   185 -RSVGAKSRIKG-------------------------TLRIYHAFIRETREQSEPSSGNSDGEWE 223

Mouse   249 PTNTNVNTSTSEGATSGLIIPLTISGGSGPRPLNTVSQAPLPPGWEQRVDQHGRVYYVDHVEKRT 313
            ...     :|:.|.||           :.|.|..|.....||.|||:|.|.:||.|||:|..:.|
  Fly   224 HVE-----ATNAGETS-----------AQPHPFPTGGHDALPAGWEERQDANGRTYYVNHTARTT 272

Mouse   314 TWDRP------------EPLPPGWERR----VD--------------------NMGRIYY----- 337
            .||||            :.|...::||    ||                    |...:.|     
  Fly   273 QWDRPTVLNSHSSQSTDDQLASDFQRRFHISVDDTESGRSADSISHNSIEDNNNAAGLAYTPKTA 337

Mouse   338 ---------------------------------VDH----------------------------- 340
                                             |||                             
  Fly   338 ATSSAPPNTPTNNNGILAQIAMQYRAEEDQDPTVDHTSFVYNSLRHPVAHRQPEISATSLQNDLR 402

Mouse   341 ----------------FTRTTT--------WQRPTLESVRNYEQWQLQRSQLQGAMQQFNQRFIY 381
                            |||...        ||:.     |..:|.||...|.|...||..|..|.
  Fly   403 PVREAPGVPDIAITNPFTRRAAGNMAGGAGWQQE-----RRRQQMQLHIQQHQQRQQQQQQNRIL 462

Mouse   382 -----------------------GNQDLF-------------ATSQNKEFD-----PL------- 398
                                   .|:|..             :|.:|.|.|     |:       
  Fly   463 LDVDHRQQEPQHRGQRHQQQHRPSNEDTDHTDSHNPSDISAPSTRRNSEEDNAAVPPMEQNTGGE 527

Mouse   399 -GPLPPGWEKRTDSNGRVYFVNHNTRITQWEDPRSQGQLNEK------------PLPEGWEMRFT 450
             .||||.|..:...|||.:|::|.:|.|.|.|||: |:.:..            |||||||.|..
  Fly   528 EEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRN-GRASPMPNQTRRVEDDLGPLPEGWEERVH 591

Mouse   451 VDGIPYFVDHNRRATTYIDPRTGKSALDN----GPQIAYVRDFKAKVQYFRFWCQQ-LAMPQHIK 510
            .||..:::|||.|.|.:.|||     |.|    |..:.|.||:|.|.:||:...:: ..:|...:
  Fly   592 TDGRVFYIDHNTRTTQWEDPR-----LSNPNIAGQAVPYSRDYKQKYEYFKSHIRKPTNVPNKFE 651

Mouse   511 ITVTRKTLFEDSFQQIMSFSPQD-LRRRLWVIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFE 574
            |.:.|.::.|||::.|.|.:..| |:.:|||.|.||.||||||:|||||:|||.|:.||.|.|||
  Fly   652 IRIRRTSILEDSYRIISSVTKTDLLKTKLWVEFEGETGLDYGGLAREWFYLLSKEMFNPYYGLFE 716

Mouse   575 YAGKDNYCLQINPASYI-NPDHLKYFRFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDL 638
            |:..|||.||||..|.: |.:||.||:||||...||::|||.:|..|..||||.:|.||:.|||:
  Fly   717 YSAMDNYTLQINNGSGLCNEEHLSYFKFIGRIAGMAVYHGKLLDAFFIRPFYKMMLQKPIDLKDM 781

Mouse   639 ESIDPEFYNSLIWVKENNIEECGLEMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIRMVA 703
            ||:|.|:||||:|:|||:...  ||:.|.:|:::.|:...|:|||.|.||.||.|||:|||::|.
  Fly   782 ESVDTEYYNSLMWIKENDPRI--LELTFCLDEDVFGQKSQHELKPGGANIDVTNENKDEYIKLVI 844

Mouse   704 EWRLSRGVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRHAIYR-HYTRTS 767
            |||....|:||..:|.:||..|:|...::.||..|||:|:||:|.||:.||:.:.:|: .|....
  Fly   845 EWRFVARVKEQMSSFLDGFGSIIPLNLIKIFDEHELELLMCGIQNIDVKDWRENTLYKGDYHMNH 909

Mouse   768 KQIMWFWQFVKEIDNEKRMRLLQFVTGTCRLPVGGFADLMGSNGPQKFCIEKVGKENWLPRSHTC 832
            ..|.|||:.|....||.|.|||||||||.|:|:.||.:|.||||||.|.|||.|..|..||:|||
  Fly   910 IIIQWFWRAVLSFSNEMRSRLLQFVTGTSRVPMNGFKELYGSNGPQMFTIEKWGTPNNFPRAHTC 974

Mouse   833 FNRLDLPPYKSYEQLKEKLLFAIEETEGF 861
            |||||||||:.|.|||:||:.|||.::||
  Fly   975 FNRLDLPPYEGYLQLKDKLIKAIEGSQGF 1003

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ItchNP_001230641.1 C2_E3_ubiquitin_ligase 17..140 CDD:175988 34/133 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 151..294 22/143 (15%)
WW 289..318 CDD:278809 16/28 (57%)
WW 321..350 CDD:278809 15/143 (10%)
Required for interaction with FYN. /evidence=ECO:0000250 356..432 32/124 (26%)
WW 401..430 CDD:278809 12/28 (43%)
WW 440..471 CDD:197736 16/30 (53%)
HECTc 509..862 CDD:238033 189/356 (53%)
HECTc 533..861 CDD:214523 180/330 (55%)
MAP kinase docking site 535..544 4/8 (50%)
Nedd4NP_648993.1 C2_NEDD4_NEDD4L 71..204 CDD:175999 43/221 (19%)
WW 248..277 CDD:278809 16/28 (57%)
WW 531..560 CDD:278809 12/28 (43%)
WW 581..613 CDD:197736 18/36 (50%)
HECTc 650..1003 CDD:238033 187/354 (53%)
HECTc 674..1003 CDD:214523 180/330 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100256
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2273
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.740

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