DRSC/TRiP Functional Genomics Resources

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Protein Alignment DCTN1 and CLIP-190

DIOPT Version :9

Sequence 1:NP_004073.2 Gene:DCTN1 / 1639 HGNCID:2711 Length:1278 Species:Homo sapiens
Sequence 2:NP_001368962.1 Gene:CLIP-190 / 35042 FlyBaseID:FBgn0020503 Length:1795 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DCTN1NP_004073.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
CAP_GLY 30..94 CDD:279625
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 100..223
FAM76 <135..292 CDD:292665
CCDC144C 227..547 CDD:291576
PCRF 246..>342 CDD:305100
CASP_C 314..>455 CDD:285395
Dynactin 525..805 CDD:289240
Interaction with HPS6. /evidence=ECO:0000269|PubMed:25189619 911..1278
FAM76 <952..1034 CDD:292665
CLIP-190NP_001368962.1 PHA03307 <2..>118 CDD:223039
CAP_GLY 125..189 CDD:396049
CAP_GLY 239..306 CDD:396049
SMC_prok_B <546..912 CDD:274008
Smc 734..1591 CDD:224117
SHE3 1502..1702 CDD:293683
CLIP1_ZNF 1773..1789 CDD:406934
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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