DRSC/TRiP Functional Genomics Resources

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Protein Alignment GBP6 and gbp2

DIOPT Version :10

Sequence 1:NP_940862.2 Gene:GBP6 / 163351 HGNCID:25395 Length:633 Species:Homo sapiens
Sequence 2:XP_699217.3 Gene:gbp2 / 570622 ZFINID:ZDB-GENE-070912-618 Length:625 Species:Danio rerio


Alignment Length:630 Identity:274/630 - (43%)
Similarity:399/630 - (63%) Gaps:9/630 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     1 MESGPKMLAPVCLVENNN-EQLLVNQQAIQILEKISQPVVVVAIVGLYRTGKSYLMNHLAGQNHG 64
            |..|..|.|||||:||:. .:|.|.::|..||::|::|||||::|||||||||||||.|||:..|
Zfish     1 MAFGRHMSAPVCLIENDEFGKLCVKKEAKDILDEINEPVVVVSVVGLYRTGKSYLMNRLAGKQSG 65

Human    65 FPLGSTVQSETKGIWMWCVPHPSKPNHTLVLLDTEGLGDVEKGDPKNDSWIFALAVLLCSTFVYN 129
            |.||||::|:||||||||||||.|..||||||||||||||:|||.|:|:|||.|||||.|..|||
Zfish    66 FALGSTIESKTKGIWMWCVPHPDKKGHTLVLLDTEGLGDVDKGDEKHDTWIFCLAVLLSSALVYN 130

Human   130 SMSTINHQALEQLHYVTELTELIKAKSSPRPDGVEDSTEFVSFFPDFLWTVRDFTLELKLNGHPI 194
            |:..|::.|||:|||||||||.|:.||....| .::|.||:..||.|:|.|||||||||::..||
Zfish   131 SLGVIDNMALEKLHYVTELTENIRVKSEGNQD-EDESEEFMRVFPSFVWAVRDFTLELKMDDKPI 194

Human   195 TEDEYLENALKLIQGNNPRVQTSNFPRECIRRFFPKRKCFVFDRPTNDKDLLANIEKVSEKQLDP 259
            |.|||||:||||.:|::|::...|.||.|:|.||..||||||.||.:.:| :..:|.::|.:||.
Zfish   195 TSDEYLESALKLKKGHSPQIAQYNLPRRCLREFFAPRKCFVFPRPASTQD-MKRMEDLTEGELDS 258

Human   260 KFQEQTNIFCSYIFTHARTKTLREGITVTGNRLGTLAVTYVEAINSGAVPCLENAVITLAQRENS 324
            :|.:|.|.|||||:.....||::.|.|:||..||.||..|||||.||.||||||||::||:.:|.
Zfish   259 EFLQQANTFCSYIYDSTEPKTVKGGRTITGTALGNLAEVYVEAIRSGKVPCLENAVVSLAKIQNV 323

Human   325 AAVQRAADYYSQQMAQRVKLPTDTLQELLDMHAACEREAIAIFMEHSFKDENQEFQKKFMETTMN 389
            .||::|...|..:|....:||.|. :||..:|...|::||..|:..||.|.:|.:|::.|....|
Zfish   324 RAVEQALQIYMTEMLSMAQLPLDP-EELSSIHTLAEKKAIEEFINMSFNDNDQIYQQELMGKIHN 387

Human   390 KKGDFLLQNEESSVQYCQAKLNELSKGLMESISAGSFSVPGGHKLYMETKERIEQDYWQVPRKGV 454
            :..|...||.::|:..||..|.::...|..:||.||:..|||::.|.....::...|....:..:
Zfish   388 EYQDLCQQNHQASLMQCQEVLEDVFDPLEMNISNGSYLRPGGYREYRALLAQLTSSYRARTKSQI 452

Human   455 KAKEVFQRFLESQMVIEESILQSDKALTDREKAVAVDRAKKEAAEKEQELLKQKLQEQQQQMEAQ 519
            .::||...||:.:..:...|||:|::|:..|:...|...|.|..::.|..|:::.:.|:|..:..
Zfish   453 MSEEVLCMFLKGKEDVGNMILQADESLSAAEQEKEVQMLKNEILQQRQRGLEEQNRLQEQAFKDM 517

Human   520 DKSRKENIAQLKEKLQMEREHLLREQIMMLEHTQKVQNDWLHEGFKKKYEEMNAEISQFKRMIDT 584
            :::.:|::.|:..:::.|:|.:.|:...:||...|.:...|.:||:::...|..||:..|..:..
Zfish   518 ERTHQEHVNQIVHQMEREQERIRRDNERVLEAKLKEREALLKQGFEEEASRMQKEINSLKTDMSK 582

Human   585 TKNDDTPWIARTLDNLADELTAILSAPA---KLIGHGVKGVSSLF 626
            .:......:.:.||.:....|..|  |.   |..|.|:..:|.||
Zfish   583 QEESKPSTMRKVLDGIGTAATLFL--PGFIPKAAGIGLSFLSRLF 625

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBP6NP_940862.2 GTPase domain (Globular). /evidence=ECO:0000250|UniProtKB:P32455 1..310 182/309 (59%)
GBP 18..281 CDD:460516 155/263 (59%)
GBP_C 283..579 CDD:460721 96/295 (33%)
gbp2XP_699217.3 None

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