DRSC/TRiP Functional Genomics Resources

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Protein Alignment GBP6 and Gbp9

DIOPT Version :9

Sequence 1:NP_940862.2 Gene:GBP6 / 163351 HGNCID:25395 Length:633 Species:Homo sapiens
Sequence 2:NP_766365.1 Gene:Gbp9 / 236573 MGIID:3605620 Length:619 Species:Mus musculus


Alignment Length:587 Identity:415/587 - (70%)
Similarity:494/587 - (84%) Gaps:3/587 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     5 PKMLAPVCLVENNNEQLLVNQQAIQILEKISQPVVVVAIVGLYRTGKSYLMNHLAGQNHGFPLGS 69
            |:| ||:|||||:||||||||:||:|||||||||||||||||||||||||||.||||||||||||
Mouse     4 PQM-APICLVENHNEQLLVNQEAIEILEKISQPVVVVAIVGLYRTGKSYLMNCLAGQNHGFPLGS 67

Human    70 TVQSETKGIWMWCVPHPSKPNHTLVLLDTEGLGDVEKGDPKNDSWIFALAVLLCSTFVYNSMSTI 134
            ||||:||||||||:|||:||.||||||||||||||||.:||||||||||:|||.|||||||||||
Mouse    68 TVQSQTKGIWMWCMPHPTKPEHTLVLLDTEGLGDVEKSNPKNDSWIFALSVLLSSTFVYNSMSTI 132

Human   135 NHQALEQLHYVTELTELIKAKSSPRPDGVEDSTEFVSFFPDFLWTVRDFTLELKLNGHPITEDEY 199
            ||||||||||||||||||::|||..|.|:::|||||||||||:||||||.|||||||..||.|||
Mouse   133 NHQALEQLHYVTELTELIRSKSSRNPHGIKNSTEFVSFFPDFVWTVRDFMLELKLNGEDITSDEY 197

Human   200 LENALKLIQGNNPRVQTSNFPRECIRRFFPKRKCFVFDRPTNDKDLLANIEKVSEKQLDPKFQEQ 264
            ||||||||.|.|||||.||..|||||.|||.||||||||||:|::||..:|.:||.|||.||:|.
Mouse   198 LENALKLIPGYNPRVQASNSARECIRCFFPNRKCFVFDRPTHDRELLQKLETISEDQLDLKFREG 262

Human   265 TNIFCSYIFTHARTKTLREGITVTGNRLGTLAVTYVEAINSGAVPCLENAVITLAQRENSAAVQR 329
            |..|.||:||:|:.|||||||.|||||||||..|||:||||||||||::|:.::|:||||.|||:
Mouse   263 TKAFVSYVFTYAKIKTLREGIKVTGNRLGTLVTTYVDAINSGAVPCLDDAMTSVARRENSVAVQK 327

Human   330 AADYYSQQMAQRVKLPTDTLQELLDMHAACEREAIAIFMEHSFKDENQEFQKKFMETTMNKKGDF 394
            |||:||:|||||::|||||||||||:|||||:||:|:|||||||||||:|.||.:|....|...|
Mouse   328 AADHYSEQMAQRLRLPTDTLQELLDVHAACEKEAMAVFMEHSFKDENQQFLKKLVEIISEKIAFF 392

Human   395 LLQNEESSVQYCQAKLNELSKGLMESISAGSFSVPGGHKLYMETKERIEQDYWQVPRKGVKAKEV 459
            .|:|||:|.:|||.:|:.|||..|::||  :|||||||::|.:.:::||:||||||||||||.||
Mouse   393 WLKNEEASNKYCQEELDRLSKDFMDNIS--TFSVPGGHRIYTDMRKKIERDYWQVPRKGVKACEV 455

Human   460 FQRFLESQMVIEESILQSDKALTDREKAVAVDRAKKEAAEKEQELLKQKLQEQQQQMEAQDKSRK 524
            ||.||:||.:||.||||:|:|||..|||:|.:||:||.||||||||:||.:|||:.||||:|..|
Mouse   456 FQNFLQSQYIIESSILQADRALTAGEKAIAEERAQKEVAEKEQELLRQKQKEQQEYMEAQEKRNK 520

Human   525 ENIAQLKEKLQMEREHLLREQIMMLEHTQKVQNDWLHEGFKKKYEEMNAEISQFKRMIDTTKNDD 589
            ||:.||:.||..|||..:::..||||...|.|..:|.|||..|.||:||||.:.:..|...|.:.
Mouse   521 ENLEQLRRKLMQEREQDIKDHDMMLEKQLKDQKAFLEEGFTNKAEEINAEIERLEHNIKDKKENI 585

Human   590 TP 591
            .|
Mouse   586 GP 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBP6NP_940862.2 GTPase domain (Globular). /evidence=ECO:0000250 1..310 246/304 (81%)
GBP 18..281 CDD:280433 212/262 (81%)
GBP_C 283..579 CDD:202427 188/295 (64%)
GBP_C 289..579 CDD:293879 183/289 (63%)
coiled coil 548..559 CDD:293879 5/10 (50%)
coiled coil 568..579 CDD:293879 6/10 (60%)
Gbp9NP_766365.1 GBP 16..279 CDD:308078 212/262 (81%)
GBP_C 281..575 CDD:308475 188/295 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83959774
Domainoid 1 1.000 440 1.000 Domainoid score I9871
eggNOG 1 0.900 - - E1_KOG2037
HGNC 1 1.500 - -
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H128731
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55037
OrthoDB 1 1.010 - - D1027269at2759
OrthoFinder 1 1.000 - - FOG0000238
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100467
Panther 1 1.100 - - O PTHR10751
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X242
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1313.220

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