DRSC/TRiP Functional Genomics Resources

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Protein Alignment GBP6 and Gbp6

DIOPT Version :9

Sequence 1:NP_940862.2 Gene:GBP6 / 163351 HGNCID:25395 Length:633 Species:Homo sapiens
Sequence 2:XP_011247687.1 Gene:Gbp6 / 100702 MGIID:2140937 Length:700 Species:Mus musculus


Alignment Length:586 Identity:421/586 - (71%)
Similarity:493/586 - (84%) Gaps:4/586 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     5 PKMLAPVCLVENNNEQLLVNQQAIQILEKISQPVVVVAIVGLYRTGKSYLMNHLAGQNHGFPLGS 69
            |:| ||:|||||:||||.|||:||:||:||||||||||||||||||||||||.||||||||||||
Mouse    93 PQM-APICLVENHNEQLSVNQEAIEILDKISQPVVVVAIVGLYRTGKSYLMNCLAGQNHGFPLGS 156

Human    70 TVQSETKGIWMWCVPHPSKPNHTLVLLDTEGLGDVEKGDPKNDSWIFALAVLLCSTFVYNSMSTI 134
            ||||:||||||||:|||:||.||||||||||||||||||||||.|||||:|||.|||:||||.||
Mouse   157 TVQSQTKGIWMWCMPHPTKPEHTLVLLDTEGLGDVEKGDPKNDLWIFALSVLLSSTFIYNSMITI 221

Human   135 NHQALEQLHYVTELTELIKAKSSPRPDGVEDSTEFVSFFPDFLWTVRDFTLELKLNGHPITEDEY 199
            ||||||||||||||||||:|||||.|.|:::|||||||||||:||||||.|||||||..||.|:|
Mouse   222 NHQALEQLHYVTELTELIRAKSSPNPAGIKNSTEFVSFFPDFVWTVRDFMLELKLNGEDITSDDY 286

Human   200 LENALKLIQGNNPRVQTSNFPRECIRRFFPKRKCFVFDRPTNDKDLLANIEKVSEKQLDPKFQEQ 264
            ||||||||.|:.||:|.||..|||||.|||.||||||||||:||:||..::.::|.||||||||.
Mouse   287 LENALKLIPGDKPRMQASNSCRECIRLFFPNRKCFVFDRPTHDKELLQKLDSITEDQLDPKFQEV 351

Human   265 TNIFCSYIFTHARTKTLREGITVTGNRLGTLAVTYVEAINSGAVPCLENAVITLAQRENSAAVQR 329
            |..|.|||||:|:.|||:|||.|||||||.|..|||.||||||||||::||.||||||||.|||:
Mouse   352 TKAFVSYIFTYAKIKTLKEGIKVTGNRLGILVTTYVNAINSGAVPCLDDAVTTLAQRENSVAVQK 416

Human   330 AADYYSQQMAQRVKLPTDTLQELLDMHAACEREAIAIFMEHSFKDENQEFQKKFMETTMNKKGDF 394
            |||:||:|||||::|||:|||||||:|||||:||:|:|||||||||||:|.||.:|.....|..|
Mouse   417 AADHYSEQMAQRLRLPTETLQELLDVHAACEKEAMAVFMEHSFKDENQQFLKKLVELIGENKELF 481

Human   395 LLQNEESSVQYCQAKLNELSKGLMESISAGSFSVPGGHKLYMETKERIEQDYWQVPRKGVKAKEV 459
            |.:|||:|.:|||.:|:.|||..||:||  :|.||.||||||:.:|:||.||||||||||||.||
Mouse   482 LSKNEEASNKYCQEELDRLSKDFMENIS--TFFVPCGHKLYMDKREKIEHDYWQVPRKGVKASEV 544

Human   460 FQRFLESQMVIEESILQSDKALTDREKAVAVDRAKKEAAEKEQELLKQKLQEQQQQMEAQDKSRK 524
            ||.||:||..||.||||:|.|||..|||:|.:||:|.|||||||||:||.:|||:.||||:||.|
Mouse   545 FQSFLQSQAFIESSILQADTALTAGEKAIAEERAQKVAAEKEQELLRQKQKEQQEYMEAQEKSHK 609

Human   525 ENIAQLKEKLQMEREHLLREQIMMLEHTQKVQNDWLHEGFKKKYEEMNAEISQFKRMI-DTTKND 588
            ||:.||:.||:.|||..:::..|||:...|.|..:|.||||||.||||.||.|.:.:| |..:|.
Mouse   610 ENLEQLRRKLEQEREQDIKDHDMMLKKLMKDQKAFLEEGFKKKAEEMNKEIQQLRDVIKDKKRNT 674

Human   589 D 589
            |
Mouse   675 D 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GBP6NP_940862.2 GTPase domain (Globular). /evidence=ECO:0000250 1..310 242/304 (80%)
GBP 18..281 CDD:280433 210/262 (80%)
GBP_C 283..579 CDD:202427 196/295 (66%)
GBP_C 289..579 CDD:293879 191/289 (66%)
coiled coil 548..559 CDD:293879 4/10 (40%)
coiled coil 568..579 CDD:293879 7/10 (70%)
Gbp6XP_011247687.1 GBP 105..368 CDD:308078 210/262 (80%)
GBP_C 370..664 CDD:308475 196/295 (66%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83959778
Domainoid 1 1.000 440 1.000 Domainoid score I9871
eggNOG 00.000 Not matched by this tool.
HGNC 1 1.500 - -
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H128731
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55037
OrthoDB 1 1.010 - - D1027269at2759
OrthoFinder 1 1.000 - - FOG0000238
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100467
Panther 1 1.100 - - O PTHR10751
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X242
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.360

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