DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ZNF846 and sp5a

DIOPT Version :9

Sequence 1:NP_001071092.1 Gene:ZNF846 / 162993 HGNCID:27260 Length:533 Species:Homo sapiens
Sequence 2:NP_851304.2 Gene:sp5a / 353154 ZFINID:ZDB-GENE-030430-2 Length:368 Species:Danio rerio


Alignment Length:133 Identity:51/133 - (38%)
Similarity:70/133 - (52%) Gaps:28/133 - (21%)


- Green bases have known domain annotations that are detailed below.


Human   192 HTQEKL--------CECKDCWRTFLNQSSLKLHIRSHNGD----KHYVC--KECGKAFSNSSHLI 242
            ||:..|        |.|.:|      |||      |.:.:    |.::|  ..|||.:..:|||.
Zfish   229 HTKSPLATARRCRRCRCPNC------QSS------SSSDEPGKKKQHICHIPGCGKVYGKTSHLK 281

Human   243 GHGRIHSGEKPYVCK--ECGKAFTQSTGLKLHIRTHSGEKPYKCKECGKAFTHSSYLTDHTRIHS 305
            .|.|.||||:|:||.  .|||:||:|..|:.|:|||:|||.:.|.:|.|.|..|.:|..|.:.|.
Zfish   282 AHLRWHSGERPFVCNWLFCGKSFTRSDELQRHLRTHTGEKRFVCPDCCKRFMRSDHLAKHVKTHQ 346

Human   306 GKK 308
            .||
Zfish   347 NKK 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF846NP_001071092.1 KRAB 8..67 CDD:214630
KRAB 8..45 CDD:279668
COG5048 106..496 CDD:227381 51/133 (38%)
C2H2 Zn finger 120..136 CDD:275368
C2H2 Zn finger 200..220 CDD:275368 5/19 (26%)
C2H2 Zn finger 228..248 CDD:275368 9/21 (43%)
C2H2 Zn finger 256..276 CDD:275368 10/21 (48%)
zf-H2C2_2 269..293 CDD:290200 12/23 (52%)
C2H2 Zn finger 284..304 CDD:275368 7/19 (37%)
zf-H2C2_2 296..321 CDD:290200 5/13 (38%)
C2H2 Zn finger 312..332 CDD:275368
zf-H2C2_2 328..347 CDD:290200
zf-C2H2 338..360 CDD:278523
C2H2 Zn finger 340..360 CDD:275368
zf-H2C2_2 352..377 CDD:290200
C2H2 Zn finger 368..388 CDD:275368
zf-H2C2_2 381..405 CDD:290200
C2H2 Zn finger 396..416 CDD:275368
zf-H2C2_2 408..433 CDD:290200
C2H2 Zn finger 424..444 CDD:275368
zf-H2C2_2 437..461 CDD:290200
C2H2 Zn finger 452..472 CDD:275368
zf-H2C2_2 464..489 CDD:290200
C2H2 Zn finger 480..500 CDD:275368
zf-H2C2_2 492..517 CDD:290200
C2H2 Zn finger 508..527 CDD:275368
sp5aNP_851304.2 C2H2 Zn finger 268..287 CDD:275368 8/18 (44%)
zf-H2C2_2 279..306 CDD:290200 15/26 (58%)
C2H2 Zn finger 295..317 CDD:275368 10/21 (48%)
zf-H2C2_2 309..332 CDD:290200 11/22 (50%)
C2H2 Zn finger 325..345 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.