DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lrig1 and Dscam2

DIOPT Version :9

Sequence 1:NP_032403.2 Gene:Lrig1 / 16206 MGIID:107935 Length:1091 Species:Mus musculus
Sequence 2:NP_001261500.1 Gene:Dscam2 / 38788 FlyBaseID:FBgn0265296 Length:2101 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Lrig1NP_032403.2 leucine-rich repeat 53..71 CDD:275380
LRR_RI 57..325 CDD:238064
LRR 1 71..92
leucine-rich repeat 72..95 CDD:275380
LRR_8 73..129 CDD:290566
LRR 2 95..116
LRR 3 118..139
LRR_8 142..225 CDD:290566
LRR 4 142..163
leucine-rich repeat 143..166 CDD:275380
LRR 5 166..187
leucine-rich repeat 167..190 CDD:275380
leucine-rich repeat 191..214 CDD:275380
LRR 6 191..212
LRR_8 213..273 CDD:290566
LRR 7 214..235
leucine-rich repeat 215..238 CDD:275380
LRR_RI 238..>423 CDD:238064
LRR 8 238..259
leucine-rich repeat 239..262 CDD:275380
LRR_8 261..321 CDD:290566
LRR 9 262..283
leucine-rich repeat 263..286 CDD:275380
LRR 10 286..307
leucine-rich repeat 287..310 CDD:275380
LRR_8 310..369 CDD:290566
LRR 11 310..331
leucine-rich repeat 311..334 CDD:275380
LRR 12 334..355
leucine-rich repeat 335..358 CDD:275380
LRR 13 358..380
leucine-rich repeat 359..383 CDD:275380
LRR_8 385..441 CDD:290566
LRR 14 385..406
leucine-rich repeat 386..409 CDD:275380
LRR 15 409..430
leucine-rich repeat 410..433 CDD:275380
LRRCT 444..492 CDD:214507
Ig_3 496..583 CDD:290638
I-set 497..597 CDD:254352
I-set 601..691 CDD:254352
Ig_1 618..692 CDD:143240
I-set 695..782 CDD:254352
IGc2 709..772 CDD:197706
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 912..990
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1059..1091
Dscam2NP_001261500.1 Ig 51..127 CDD:299845
Ig 138..>203 CDD:299845
I-set 238..327 CDD:254352
Ig 247..327 CDD:299845
I-set 332..418 CDD:254352
IGc2 344..407 CDD:197706
IG_like 432..517 CDD:214653
IGc2 436..507 CDD:197706
I-set 521..610 CDD:254352
IGc2 533..597 CDD:197706
Ig 630..699 CDD:143165
IG_like 714..802 CDD:214653
Ig 725..802 CDD:299845
Ig 823..894 CDD:143165
FN3 906..1006 CDD:238020
FN3 1013..1111 CDD:238020
FN3 1119..1209 CDD:238020
FN3 1219..1313 CDD:238020
Ig 1336..1402 CDD:143165
FN3 1409..1498 CDD:238020
FN3 1515..1588 CDD:238020
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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