DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAZL and CG34354

DIOPT Version :10

Sequence 1:NP_001177740.1 Gene:DAZL / 1618 HGNCID:2685 Length:315 Species:Homo sapiens
Sequence 2:NP_001097953.2 Gene:CG34354 / 5740528 FlyBaseID:FBgn0085383 Length:550 Species:Drosophila melanogaster


Alignment Length:208 Identity:40/208 - (19%)
Similarity:75/208 - (36%) Gaps:47/208 - (22%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAAPSCG-GDRKARLTPSLPHESTANPETPNSTISREASTQSSSAAT------------------ 46
            |.||:.. |..:..:.|..|.|:......|.:..:..|..|..|...                  
  Fly     9 MPAPTIAMGAPQITMGPHKPPETKLLAIHPAAAAAAAAQQQQQSVTAAHLQHNGQQQHSQQQQQQ 73

Human    47 --SQGYILPEGKIMPNT-------VFVGGIDVRMDETEIRSFFARYGSVKEVKIITD-RTGVSKG 101
              ||.....:.:::.|.       :|||.:...::..:::..|..:|.:.:.:::.| :|..|||
  Fly    74 QMSQQQQQQQQQLVGNNSKPEQFHIFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKG 138

Human   102 YGFVSFFNDVDVQKIVESQIN--FHGKKLKLGPAIRKQNLCAYHVQPRPLVFNHPPPPQFQNVWT 164
            ||||||....:.:..:.:...  ...:.::...|.||.......:..:||.|:            
  Fly   139 YGFVSFVKKSEAETAITAMNGQWLGSRSIRTNWATRKPPATKADMNAKPLTFD------------ 191

Human   165 NPNTETYMQPTTT 177
                |.|.|.:.|
  Fly   192 ----EVYNQSSPT 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DAZLNP_001177740.1 RRM_DAZL 55..136 CDD:410073 18/90 (20%)
PABP-1234 <60..228 CDD:130689 27/128 (21%)
CG34354NP_001097953.2 PABP-1234 <90..420 CDD:130689 26/127 (20%)
RRM2_TIA1_like 97..171 CDD:409789 16/73 (22%)
RRM3_TIA1_like 202..276 CDD:409790
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.