DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAZL and Hrb87F

DIOPT Version :10

Sequence 1:NP_001177740.1 Gene:DAZL / 1618 HGNCID:2685 Length:315 Species:Homo sapiens
Sequence 2:NP_476806.2 Gene:Hrb87F / 48535 FlyBaseID:FBgn0004237 Length:385 Species:Drosophila melanogaster


Alignment Length:124 Identity:34/124 - (27%)
Similarity:59/124 - (47%) Gaps:16/124 - (12%)


- Green bases have known domain annotations that are detailed below.


Human    19 PHESTANPETPNSTISREASTQSSSAATSQGYILPEGKIMPNTVFVGGIDVRMDETEIRSFFARY 83
            ||:.......|...:.|:.....::.||.:            .:||||:....||..:|.:|..:
  Fly    86 PHKIDGRTVEPKRAVPRQEIDSPNAGATVK------------KLFVGGLRDDHDEECLREYFKDF 138

Human    84 GSVKEVKIITDR-TGVSKGYGFVSFFNDVD-VQKIV-ESQINFHGKKLKLGPAIRKQNL 139
            |.:..|.|::|: ||..:|:.|:. |:|.| |.||: :...:...|.|.:..||.||::
  Fly   139 GQIVSVNIVSDKDTGKKRGFAFIE-FDDYDPVDKIILQKTHSIKNKTLDVKKAIAKQDM 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DAZLNP_001177740.1 RRM_DAZL 55..136 CDD:410073 26/83 (31%)
PABP-1234 <60..228 CDD:130689 28/83 (34%)
Hrb87FNP_476806.2 RRM1_hnRNPA_like 25..102 CDD:409992 3/15 (20%)
RRM_SF 116..188 CDD:473069 24/72 (33%)

Return to query results.
Submit another query.