DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DAZL and Rb97D

DIOPT Version :10

Sequence 1:NP_001177740.1 Gene:DAZL / 1618 HGNCID:2685 Length:315 Species:Homo sapiens
Sequence 2:NP_524520.1 Gene:Rb97D / 43231 FlyBaseID:FBgn0004903 Length:471 Species:Drosophila melanogaster


Alignment Length:262 Identity:68/262 - (25%)
Similarity:97/262 - (37%) Gaps:79/262 - (30%)


- Green bases have known domain annotations that are detailed below.


Human    54 EGKIMPNTVFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVD-VQKI 116
            |..|....:||||:....||..:|.:|.::|:|..||::||: ||..:|:.||. |:|.| |.|.
  Fly   117 ETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVE-FDDYDAVDKA 180

Human   117 VESQINFHGKKLKLGPAIRKQNLCAY-HVQPRPLVFN---------------------------- 152
            :                ::||:...| ||..:..::|                            
  Fly   181 I----------------LKKQHAIKYVHVDVKKSIYNLDKKEKQQPGGLANAIKPSLNQQQQQQG 229

Human   153 ---HPPPPQFQNVWTNPNTETYMQPTTTMNPITQYVQAYPTYPNSPVQVITGY------QLPVYN 208
               .||....|    .|:....:.|...|.|   |.|..|..|.|.......|      .:|.|.
  Fly   230 GGQQPPNGNMQ----APSFRPPVPPQQAMGP---YQQQPPPAPMSAPPPNFNYWGPPPPAMPPYY 287

Human   209 YQMPPQ-------WPVGEQRSYVV--PPAYSAVNYHCNE--VDPGAEVVPNECSVHEATPPSG-N 261
            .|.|||       :|..:|..:..  ||...|..:|.|:  ..|..:.||   .|....||.| |
  Fly   288 QQPPPQQMNGWGPYPPPQQNGWNAPPPPPPGAQQWHANQWGCPPPVQQVP---PVGAVPPPMGHN 349

Human   262 GP 263
            ||
  Fly   350 GP 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DAZLNP_001177740.1 RRM_DAZL 55..136 CDD:410073 25/82 (30%)
PABP-1234 <60..228 CDD:130689 52/216 (24%)
Rb97DNP_524520.1 RRM2_hnRNPA_like 124..196 CDD:409766 29/88 (33%)
RRM_SF 33..110 CDD:473069
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.