DRSC/TRiP Functional Genomics Resources

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Protein Alignment DAZL and Hrb27C

DIOPT Version :10

Sequence 1:NP_001177740.1 Gene:DAZL / 1618 HGNCID:2685 Length:315 Species:Homo sapiens
Sequence 2:NP_476869.1 Gene:Hrb27C / 33968 FlyBaseID:FBgn0004838 Length:421 Species:Drosophila melanogaster


Alignment Length:251 Identity:64/251 - (25%)
Similarity:98/251 - (39%) Gaps:76/251 - (30%)


- Green bases have known domain annotations that are detailed below.


Human    62 VFVGGIDVRMDETEIRSFFARYGSVKEVKIITDR-TGVSKGYGFVSFFNDVDVQKIV-ESQINFH 124
            ||:||:...:.||::|:||.|||.|.||.|:.|: ...|:|:||:||..:..|:.:. |..||.:
  Fly    98 VFLGGLPSNVTETDLRTFFNRYGKVTEVVIMYDQEKKKSRGFGFLSFEEESSVEHVTNERYINLN 162

Human   125 GKKLKL-------------------GPAIRK-QNLCAY---HVQPRPLV------FNHPP----- 155
            ||::::                   |.|..| .|.|::   |..|..::      ...||     
  Fly   163 GKQVEIKKAEPRDGSGGQNSNNSTVGGAYGKLGNECSHWGPHHAPINMMQGQNGQMGGPPLNMPI 227

Human   156 -----PPQFQNVWTNPNTETYMQPTTTMNPITQYVQAYPTYPNSPVQVITGYQLPVYNYQMPPQW 215
                 .|.:|...|:|..:.|                  .|.||......|:..|......||||
  Fly   228 GAPNMMPGYQGWGTSPQQQQY------------------GYGNSGPGSYQGWGAPPGPQGPPPQW 274

Human   216 P--VGEQRSYVVPPAYSAVNYHCNEVDPGAEVVP------NECSVHEATPPSGNGP 263
            .  .|.|::    ..|...:.: |....||...|      |..::    ||:..||
  Fly   275 SNYAGPQQT----QGYGGYDMY-NSTSTGAPSGPSGGGSWNSWNM----PPNSAGP 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DAZLNP_001177740.1 RRM_DAZL 55..136 CDD:410073 31/94 (33%)
PABP-1234 <60..228 CDD:130689 54/208 (26%)
Hrb27CNP_476869.1 RRM1_hnRNPA_hnRNPD_like 9..80 CDD:409763
RRM2_DAZAP1 94..173 CDD:409765 29/74 (39%)
Blue background indicates that the domain is not in the aligned region.

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