DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Il16 and Patj

DIOPT Version :9

Sequence 1:NP_001347016.1 Gene:Il16 / 16170 MGIID:1270855 Length:1424 Species:Mus musculus
Sequence 2:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster


Alignment Length:1031 Identity:214/1031 - (20%)
Similarity:346/1031 - (33%) Gaps:332/1031 - (32%)


- Green bases have known domain annotations that are detailed below.


Mouse   161 SSMQLADTFEAGL--SNIPDLALASDSAQLAAAGSDRGKHCRKMFFMKESSSTSSKEKSGKPEAQ 223
            |::|..:..:.|:  |:.|.|.:.:..:.....|..:....|.:..:::|.|..:.:.:..|...
  Fly     9 SALQQIEAVKKGIDESDDPKLQMQTAESLSTILGILQDPVFRTIVHVQDSLSELNAQLAQHPSML 73

Mouse   224 SSSFLFPKACHQRTRSNSTSVNPYSAGEI--DFPMTKKSAAPTDRQPYSLCSNRKSLSQQLDYPI 286
            .:.|....|        ...|...:.||:  ||. .::|::.:...|.|...:.           
  Fly    74 PNDFDIDVA--------GNLVLSLNGGEVMYDFD-EQRSSSHSHSAPGSPDKSG----------- 118

Mouse   287 LGTARPTRSLSTAQLGQLSGGLQASVISNI--VLMKGQAKGLGFSIVGGKDSIYGPIGIYVKSIF 349
             |.....|..|....|.....|.|:..:.|  :.:.....||||.|:|.::|     |:.||:|.
  Fly   119 -GVGEEPRPQSQNSKGAGVADLYATDYAQIQAIELVNDGTGLGFGIIGARNS-----GVIVKTIL 177

Mouse   350 AGGAAAADGRLQEGDEILELNGESMAGLTHQDALQKFKQA-----------------------KK 391
            .||.|..||||:.||.||::...::..:..:......:|:                       :.
  Fly   178 PGGVADKDGRLRSGDHILQIGDVNLHEMVSEQVAAVLRQSGTHVRLVVARPVEQSVPTPQYALEP 242

Mouse   392 GLLTLTVRTRLTTPPSLCSHLSPPLCRSLSSSTCGAQDSSP--FSLESPAS-PASTAK------- 446
            |  |..|.||:...|:       .|.|.|.|:      ..|  |...|.|| |.:|.:       
  Fly   243 G--TAVVPTRVLVDPA-------ELERYLIST------GYPEIFGESSTASTPQTTTEDDRFVYR 292

Mouse   447 --------PNYRI----------MVEVSLKKEAGVGLGIGLCSIPYFQC----ISGIFVHTLSPG 489
                    ||..:          .::|.|||:|. ||||   :|..:.|    :|||||.::|||
  Fly   293 GETSMLIDPNIDLEELLALPETEKLQVELKKDAN-GLGI---TIAGYVCEKEELSGIFVKSVSPG 353

Mouse   490 SVAHLDGRLRCGDEIVEINDSPVHCLTLNEVYTILSHCDPGPVPIIVSRHPDPQVSEQQLKEAVA 554
            |.|.|.||:|..|.|:|::...:      :.|               |.|               
  Fly   354 SAADLSGRIRVNDRIIEVDGQSL------QGY---------------SNH--------------- 382

Mouse   555 QAVEGVKFGKDRHQWSLEGVKRLESSWHGRPTLEKEREKHSAPPHRRAQKIMVRSSSDSSYMSGS 619
            ||||.:|  |.....:|    |||....|             |...:.|:.:..:....|...|:
  Fly   383 QAVELLK--KSGQVVNL----RLERYLRG-------------PKFEQLQQAIAANDKLPSSAPGT 428

Mouse   620 PGGSPCSAGAEPQP-SEREGSTHSPSLSPGEEQEPCPGVPSRPQQESPPLPESLERESHPP---- 679
            |..:|.     |.| :....:|.:||.|...|.|          :|:.|.||:.  .:.||    
  Fly   429 PSRAPM-----PTPVATTSSATTTPSRSITRELE----------EEALPAPEAF--MTTPPSVTT 476

Mouse   680 --LRLKKSFE-----ILVRKPTSSKPKPPPRKYF----KNDSEPQKKLEEKEKVTDPSGHTLPTC 733
              .....||.     :.||.......|..|.:..    |.:::....:...:..|||.    .:.
  Fly   477 MTTTTLSSFGAGKQLVAVRDSLDGSTKIIPTEVVPLADKTEAKNSGVITRHKYYTDPE----LSD 537

Mouse   734 SQETR-------------ELLPLLLQEDTAGRAPCTAACCPGPAASTQTSSSTEG--ESR----- 778
            ..||.             |::...:::...|          |...|.:.:...||  |.|     
  Fly   538 DAETEIIRKWQKIVGSDVEVIVAQIKKFAVG----------GLGISLEGTVDVEGGREVRPHHYI 592

Mouse   779 RSASPETPASPGKHPLLKRQARMDYSFDITAEDPWVRISDCIKNLFSPIMSENH-------SHTP 836
            ||..|:.|.  |.:.:|:..   |...::..|               .::..||       ...|
  Fly   593 RSILPDGPV--GVNGVLRSG---DELLEVNGE---------------RLLGMNHLEVVAILKELP 637

Mouse   837 LQPNTSLGEEDGTQGCP--EGGLSKM--DAANGAP---RVYKS-ADGS-----TVKKGPPVAPKP 888
            |......|....:...|  :..|.|:  :..|..|   |:.|: :|||     :|..|..||...
  Fly   638 LDVRMVCGRNRNSSLLPFSDDTLKKLSNNFENLLPATDRLVKAKSDGSLATAGSVADGDSVAAAA 702

Mouse   889 AWFRQSLKGLRNRAPDP-------RRPPEVASAIQ------------PTPVSRDP---------- 924
            |.|.:    |::|:.:|       ...|::...::            ..|:  ||          
  Fly   703 ASFSK----LKSRSLEPLTGLAMWSSQPQIIELVKGDRGLGFSILDYQDPL--DPNDTLIVIRSL 761

Mouse   925 -PGPQPQASSSI----RQRISSFENFGSSQLPDRGVQRLSLQPSSGETTKFPGKQDGGRFSGLLG 984
             ||...|....:    |....:..|..::.| |:.||.|.                 |...|::.
  Fly   762 VPGGVAQLDGRLIPGDRLLFVNSINLENASL-DQAVQALK-----------------GASKGVVR 808

Mouse   985 QGATVTAKHRQTEVESMSTTFPNSSEVRD-----PGLPESPPPGQRPS-TKALSPD 1034
            .|...........:::.|.....|.|..|     |.||...||...|| :....||
  Fly   809 IGVAKPLPMTDNSLKACSNASTTSEETLDAQPSPPALPTVAPPAMPPSASMGAEPD 864

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Il16NP_001347016.1 PDZ_signaling 316..391 CDD:238492 24/99 (24%)
PDZ_signaling 454..536 CDD:238492 29/85 (34%)
Atrophin-1 <620..931 CDD:331285 74/396 (19%)
PDZ_signaling 1206..1283 CDD:238492
PDZ_signaling 1328..1409 CDD:238492
PatjNP_477342.1 L27 12..70 CDD:295425 9/57 (16%)
PDZ_signaling 154..226 CDD:238492 23/76 (30%)
PDZ_signaling 318..400 CDD:238492 39/127 (31%)
PDZ_signaling 557..643 CDD:238492 19/115 (17%)
PDZ_signaling 726..807 CDD:238492 16/100 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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