DRSC/TRiP Functional Genomics Resources

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Protein Alignment DAZ1 and hrb1

DIOPT Version :10

Sequence 1:NP_004072.3 Gene:DAZ1 / 1617 HGNCID:2682 Length:744 Species:Homo sapiens
Sequence 2:NP_594207.3 Gene:hrb1 / 2542567 PomBaseID:SPAC328.05 Length:464 Species:Schizosaccharomyces pombe


Alignment Length:479 Identity:94/479 - (19%)
Similarity:160/479 - (33%) Gaps:143/479 - (29%)


- Green bases have known domain annotations that are detailed below.


Human    42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGK 106
            |:||.:..::...|:....|:.|:|...:|:....|:|||...:.:....:.:..:         
pombe    79 VYVGNLSYQVRWFELKEFMGQVGNVLNCEILNLPNGLSKGCAIIEYSTAEEARTAI--------- 134

Human   107 KLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQSAANP 171
                 ..:..||...|.|                          |::.....|            
pombe   135 -----KTLSNQKFMGRLV--------------------------YIREDREQN------------ 156

Human   172 ETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKI 236
                   :|..|:..|.:|:|.|    :.......:|||.:...:...::...|.:.|||....|
pombe   157 -------ARFGSSSVSPSASSNG----KDSEPDRQLFVGNLPYNVRWQDLKDLFRQAGSVIRADI 210

Human   237 ITNRTGVSKGYGFVSFVNDVDVQKIVGSQIH---FHGKKLKLGPAIRKQKLCARHVQPRPLVVNP 298
            ..|:.|.|:|.|.|...:..:....: ..:|   |.|:.|:    :|..:..  |.:.:|...:.
pombe   211 QMNQEGRSRGIGIVVMSSMKEAMHAI-QMLHNTDFMGRTLE----VRLDRFA--HHKSKPYSTHG 268

Human   299 PP---PPQFQNVWRNPNTETYLQPQITPNPVTQHVQSAANPETPNSTISREASTQSSSAAASQGW 360
            ..   |.:.|..    .:.||| |.:..|...:.:...|.|..|.|                   
pombe   269 NGYTFPAEMQMT----TSSTYL-PMLGANTQVEDLVYHAYPHGPCS------------------- 309

Human   361 VLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVD--- 422
                     :.::||.:.....:..:...|...|||...:|....||.|||:|.|.|.|:.|   
pombe   310 ---------DCIYVGNLPWATSDRNLLDLFTDIGSVIRARIAYEPTGRSKGFGVVQFENENDAAS 365

Human   423 -VQKIVGSQIHFHGKKLKLGPAIRKQKLCARHVQPRPLV---------VNPPPPPQFQNVWRNPN 477
             ::|:.|  ..:.|:.|:|.        .|.:..|.|.|         |...||     |...|.
pombe   366 SIEKLNG--YRYGGRPLQLS--------YAHYATPLPAVPTVLSGLPSVAYTPP-----VMHIPT 415

Human   478 TETYLQPQITPN------PVTQHV 495
            |.:.|.||...|      |::..|
pombe   416 TNSPLTPQSFTNSFLGYLPISMPV 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DAZ1NP_004072.3 RRM_DAZL 35..116 CDD:410073 12/73 (16%)
PABP-1234 42..603 CDD:130689 94/479 (20%)
RRM_DAZL 200..281 CDD:410073 18/83 (22%)
RRM_DAZL 365..446 CDD:410073 22/84 (26%)
Daz 596..616 CDD:465893
Daz 620..640 CDD:465893
Daz 644..664 CDD:465893
Daz 668..688 CDD:465893
Daz 692..712 CDD:465893
hrb1NP_594207.3 PABP-1234 62..>385 CDD:130689 78/418 (19%)
Blue background indicates that the domain is not in the aligned region.

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