DRSC/TRiP Functional Genomics Resources

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Protein Alignment DAZ1 and SPAC328.05

DIOPT Version :9

Sequence 1:NP_004072.3 Gene:DAZ1 / 1617 HGNCID:2682 Length:744 Species:Homo sapiens
Sequence 2:NP_594207.3 Gene:SPAC328.05 / 2542567 PomBaseID:SPAC328.05 Length:464 Species:Schizosaccharomyces pombe


Alignment Length:479 Identity:94/479 - (19%)
Similarity:160/479 - (33%) Gaps:143/479 - (29%)


- Green bases have known domain annotations that are detailed below.


Human    42 VFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVDVQKIVGSQIHFHGK 106
            |:||.:..::...|:....|:.|:|...:|:....|:|||...:.:....:.:..:         
pombe    79 VYVGNLSYQVRWFELKEFMGQVGNVLNCEILNLPNGLSKGCAIIEYSTAEEARTAI--------- 134

Human   107 KLKLGPAIRKQKLCARHVQPRPLVVNPPPPPQFQNVWRNPNTETYLQPQITPNPVTQHVQSAANP 171
                 ..:..||...|.|                          |::.....|            
pombe   135 -----KTLSNQKFMGRLV--------------------------YIREDREQN------------ 156

Human   172 ETPNSTISREASTQSSSAAASQGWVLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKI 236
                   :|..|:..|.:|:|.|    :.......:|||.:...:...::...|.:.|||....|
pombe   157 -------ARFGSSSVSPSASSNG----KDSEPDRQLFVGNLPYNVRWQDLKDLFRQAGSVIRADI 210

Human   237 ITNRTGVSKGYGFVSFVNDVDVQKIVGSQIH---FHGKKLKLGPAIRKQKLCARHVQPRPLVVNP 298
            ..|:.|.|:|.|.|...:..:....: ..:|   |.|:.|:    :|..:..  |.:.:|...:.
pombe   211 QMNQEGRSRGIGIVVMSSMKEAMHAI-QMLHNTDFMGRTLE----VRLDRFA--HHKSKPYSTHG 268

Human   299 PP---PPQFQNVWRNPNTETYLQPQITPNPVTQHVQSAANPETPNSTISREASTQSSSAAASQGW 360
            ..   |.:.|..    .:.||| |.:..|...:.:...|.|..|.|                   
pombe   269 NGYTFPAEMQMT----TSSTYL-PMLGANTQVEDLVYHAYPHGPCS------------------- 309

Human   361 VLPEGKIVPNTVFVGGIDARMDETEIGSCFGRYGSVKEVKIITNRTGVSKGYGFVSFVNDVD--- 422
                     :.::||.:.....:..:...|...|||...:|....||.|||:|.|.|.|:.|   
pombe   310 ---------DCIYVGNLPWATSDRNLLDLFTDIGSVIRARIAYEPTGRSKGFGVVQFENENDAAS 365

Human   423 -VQKIVGSQIHFHGKKLKLGPAIRKQKLCARHVQPRPLV---------VNPPPPPQFQNVWRNPN 477
             ::|:.|  ..:.|:.|:|.        .|.:..|.|.|         |...||     |...|.
pombe   366 SIEKLNG--YRYGGRPLQLS--------YAHYATPLPAVPTVLSGLPSVAYTPP-----VMHIPT 415

Human   478 TETYLQPQITPN------PVTQHV 495
            |.:.|.||...|      |::..|
pombe   416 TNSPLTPQSFTNSFLGYLPISMPV 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DAZ1NP_004072.3 RRM_DAZL 35..116 CDD:241116 12/73 (16%)
PABP-1234 42..603 CDD:130689 94/479 (20%)
RRM_DAZL 200..281 CDD:241116 18/83 (22%)
RRM_DAZL 365..446 CDD:241116 22/84 (26%)
SPAC328.05NP_594207.3 RRM 71..387 CDD:223796 79/420 (19%)
RRM_SF 79..150 CDD:240668 17/110 (15%)
RRM3_hnRNPM_like 181..252 CDD:240833 18/75 (24%)
RRM_SF 312..385 CDD:302621 22/82 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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