DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Il12rb2 and Nrg

DIOPT Version :9

Sequence 1:NP_032380.1 Gene:Il12rb2 / 16162 MGIID:1270861 Length:874 Species:Mus musculus
Sequence 2:NP_001245581.1 Gene:Nrg / 31792 FlyBaseID:FBgn0264975 Length:1309 Species:Drosophila melanogaster


Alignment Length:868 Identity:174/868 - (20%)
Similarity:281/868 - (32%) Gaps:329/868 - (37%)


- Green bases have known domain annotations that are detailed below.


Mouse    83 HGKKVHDHTGH------SSTFQVTNLSLGMT-LFVCKLNCSNS------------QKKPPVPVCG 128
            :||.:...|.:      .:|.::.||..|.| .:.|  |.:||            |.:||.    
  Fly   375 NGKPIEQSTPNPRRTVTDNTIRIINLVKGDTGNYGC--NATNSLGYVYKDVYLNVQAEPPT---- 433

Mouse   129 VEISVGVAPEPPQNISCVQEGENGTVACSWNSGK---VTYLKTN-------YTLQLSGPNNLTCQ 183
              ||     |.|..:|.| :|.|.|:.|..|...   |.:|:.:       |.:|.:|  :|..|
  Fly   434 --IS-----EAPAAVSTV-DGRNVTIKCRVNGSPKPLVKWLRASNWLTGGRYNVQANG--DLEIQ 488

Mouse   184 KQCFSD-NRQNCNRLDLGINLSPDLAESRFIVRVTAINDLGNSSSL---PHTFTFLDIVIPLPPW 244
            ...||| .:..|            .|:::|       .::....||   .||             
  Fly   489 DVTFSDAGKYTC------------YAQNKF-------GEIQADGSLVVKEHT------------- 521

Mouse   245 DIRI-----NFLNASGSRGT--------------LQWEDEGQVV--LNQLRYQPLNSTSWNMVNA 288
              ||     |:..|:|...|              :.|..:||.:  ..|.|:...|..|      
  Fly   522 --RITQEPQNYEVAAGQSATFRCNEAHDDTLEIEIDWWKDGQSIDFEAQPRFVKTNDNS------ 578

Mouse   289 TNAKGKYDLRDLRPFTEYEFQISSKLHLSGGSWSNWSESLRTRTPEEEPVGILDIWYMKQDI--- 350
                               ..|:..:.|..|.::..:   |||..|......|.:    ||:   
  Fly   579 -------------------LTIAKTMELDSGEYTCVA---RTRLDEATARANLIV----QDVPNA 617

Mouse   351 --------DYDRQQISLFWKSLNPSEARGKILHYQVTLQEVTKKTTLQNTTRHT--SWTRV---I 402
                    ..|:.:|  .|:  ...:.|..||||           |:|..|..|  ||...   :
  Fly   618 PKLTGITCQADKAEI--HWE--QQGDNRSPILHY-----------TIQFNTSFTPASWDAAYEKV 667

Mouse   403 PRTGA-----------WTASVSAANSKGASAPTHINIVDLCGT----GLLAPHQVSAKSENMDNI 452
            |.|.:           :|..|.|.|..|||.|:..:  |.|.|    ....|..|..:....:|:
  Fly   668 PNTDSSFVVQMSPWANYTFRVIAFNKIGASPPSAHS--DSCTTQPDVPFKNPDNVVGQGTEPNNL 730

Mouse   453 LVTWQP-PKKADSAVR-EYIVEWRALQPGSITKFPPHWLRIPPDNMSALISENI----KP-YICY 510
            :::|.| |:...:|.. .|.|.|:...|.:.      |   ..:|:......||    :| ::.|
  Fly   731 VISWTPMPEIEHNAPNFHYYVSWKRDIPAAA------W---ENNNIFDWRQNNIVIADQPTFVKY 786

Mouse   511 EIRVHALS---ESQGGCSSIRGDSKHKAPVSGP------HITAITEKKERLFISWTHIPFPEQRG 566
            .|:|.|::   ||......:.|.|....|:..|      .||:.|..    :::||.:.....||
  Fly   787 LIKVVAINDRGESNVAAEEVVGYSGEDRPLDAPTNFTMRQITSSTSG----YMAWTPVSEESVRG 847

Mouse   567 CILHYRIY-WKERDSTAQPELCEIQYRRSQNSHPISSLQPRVTYVLWMTAVTAAGESPQGNEREF 630
            ....|:|. |.|.:  .:..|.||..:...::..::..:|.......:.|.......|.....:|
  Fly   848 HFKGYKIQTWTENE--GEEGLREIHVKGDTHNALVTQFKPDSKNYARILAYNGRFNGPPSAVIDF 910

Mouse   631 -CPQGKANWKAFVISSICIAIITVGTFSIRYFRQKAFTLLSTLKPQWYSRTIPDPANSTWVKKYP 694
             .|:|                                              :|.|...  :..||
  Fly   911 DTPEG----------------------------------------------VPSPVQG--LDAYP 927

Mouse   695 ILEEKIQLPTDNLLMAWPTPEEPE-PLIIHEVLYHMI------------PVVRQP---------- 736
                   |.:...::.|..|..|. .|..:::.|..:            |.:..|          
  Fly   928 -------LGSSAFMLHWKKPLYPNGKLTGYKIYYEEVKESYVGERREYDPHITDPRVTRMKMAGL 985

Mouse   737 -----YYF------KRGQGFQGY--STSKQDAMYIANPQATGTLTAETRQLVNLYKVLESRDPDS 788
                 |..      |.|:|.:.|  .|:.:||:.:|  .||.:.:.|  ||.:          |:
  Fly   986 KPNSKYRISITATTKMGEGSEHYIEKTTLKDAVNVA--PATPSFSWE--QLPS----------DN 1036

Mouse   789 KLANLTSPLTVTPVNYLPSHEGY 811
            .||...       :|:|||.||:
  Fly  1037 GLAKFR-------INWLPSTEGH 1052

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Il12rb2NP_032380.1 Lep_receptor_Ig 28..120 CDD:368845 12/55 (22%)
FN3 240..332 CDD:238020 18/112 (16%)
WSXWS motif 321..325 0/3 (0%)
fn3 438..523 CDD:365830 22/94 (23%)
FN3 536..630 CDD:238020 19/100 (19%)
Box 1 motif 677..685 1/7 (14%)
NrgNP_001245581.1 Ig 55..128 CDD:299845
IG_like 57..127 CDD:214653
Ig 135..214 CDD:299845
IG_like 141..216 CDD:214653
ig 251..332 CDD:278476
I-set 339..427 CDD:254352 12/53 (23%)
Ig 354..427 CDD:299845 12/53 (23%)
I-set 432..517 CDD:254352 27/117 (23%)
Ig 446..517 CDD:299845 20/91 (22%)
I-set 522..611 CDD:254352 21/116 (18%)
ig 525..609 CDD:278476 18/111 (16%)
FN3 613..707 CDD:238020 26/110 (24%)
FN3 716..807 CDD:238020 22/99 (22%)
fn3 817..905 CDD:278470 18/93 (19%)
FN3 917..1004 CDD:238020 15/95 (16%)
FN3 1041..1111 CDD:238020 6/19 (32%)
Bravo_FIGEY 1155..>1221 CDD:290593
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.